DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and otpl-6

DIOPT Version :10

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_505195.1 Gene:otpl-6 / 185807 WormBaseID:WBGene00018479 Length:581 Species:Caenorhabditis elegans


Alignment Length:650 Identity:160/650 - (24%)
Similarity:285/650 - (43%) Gaps:167/650 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   861 LTNYPV-----LPA-IKRTHRPSFVYPPMPRVKAGDALATLFSALYGKLLVVMGIAFPMAEVIST 919
            ||:|..     ||| .|.|...||            .|.:| :|||..:|.:  :|| :.|:..|
 Worm    23 LTDYSSTIPENLPAWTKNTKAQSF------------GLKSL-TALYTLILTI--VAF-IIEISPT 71

  Fly   920 YIPPSF---YEVYYLYLYIGSMIFLLFMYATLIWGRPKLPVPIASPSKSATKASGTDSMDESDTD 981
            :...|.   |.::.:.:|..::::.:::||.:::       ||         ...|..:......
 Worm    72 WQSESMNIEYTIFCVLMYSIAILYFIYLYAYILY-------PI---------VFNTILLYLERMR 120

  Fly   982 SNSVH--HRLPPPIPVRRPSLLSPLGRRDAHYGSFYLRMGAVAFG-IGSMIYSGLEFGQYFELNP 1043
            ..:||  .|...|.||     .:..|.     |:.|||:|.|.|| :||:::....|..:|   .
 Worm   121 VLNVHTVKRWVQPEPV-----FTGEGA-----GTLYLRLGTVLFGTLGSVLWGCEIFLCFF---T 172

  Fly  1044 DTKCHNV-----LLALTPATRMAFIFIQMYFIFLNNEQIKVYRYKIIARFGLMHMIGTNLAVWLN 1103
            :|: ||:     :||      ..|.::||:|:..|: :|.:.:...:|.||:||.:..||.||.:
 Worm   173 ETR-HNIYVVKYILA------FLFTYLQMHFLCCNS-KIDLPKNNFLASFGMMHCVAVNLWVWFS 229

  Fly  1104 VLIQETKHEILTFYNPENRTLRISHRIPGHSRGH----------------AIIQHDPTAHLRV-P 1151
            :.:.:      ..|..:.:||::......:.:.:                :|:..:.::..|. .
 Worm   230 LCLAK------AVYKSDKKTLKLQKAEEKYKKKNMTITEAVAETITTTIASIVSSESSSGFRADE 288

  Fly  1152 RGLKGPYQIFECRRTNIIGTLVQDASPFLFPCTIEYSLICAAILYVMWRSISRPQTPTPQRPDMI 1216
            :.|:..|::             ..|:.||....:|:|||.||:.:::|:. ...|||...|    
 Worm   289 KQLRSLYKL-------------GSAANFLLTTMVEFSLIAAAVYFIVWKH-EGEQTPQDAR---- 335

  Fly  1217 SSPMKRSPHHYSVDCARAHKGLFVGILILVLTIISLIIFFVLISRPEFVAMAVTEVTICELLIYG 1281
                   ..|...||.....|:|..|::|:.:.||:.:.:: .:..:....|...:.|.|.:::.
 Worm   336 -------KKHVRFDCKSTSVGIFAAIVLLIGSFISIAMHYI-YNNSDMPRTADEVIGIAETVLFC 392

  Fly  1282 TATIATLVGMIQIRHLQYDAY-RSFSLDDILLVGAQTGSFLY-------------------NIFT 1326
            ...:|.....|::|.|||..: ....:|:|||:....|..:|                   :..|
 Worm   393 VCLLAVFGAFIRMRKLQYRLHAHGQVVDEILLIVGLAGEIVYCSTGLDLYLNGRLENTPGTSCLT 457

  Fly  1327 VIAGHFTLRSDDMLVPINALASIVQTACQTMFILDASRRQAVSPEHLRKKPGREIVTFMLVVNLA 1391
            |:|  |.:|             |||...|::|||.|||.:::|..::..:||::||||::|.|:.
 Worm   458 VVA--FVMR-------------IVQVVVQSVFILVASRLRSLSASNISNQPGKQIVTFLVVCNIN 507

  Fly  1392 MWAISTLEKSRAESHPIQLNFYGL-----WAWTIITHVSMPLAIFYRFHSTVCLCEIWKRAYKLK 1451
            ::...|.|       .|:.|| |.     ..::.:.::|.||.:||||||:.||.||||.||..|
 Worm   508 LFIYHTFE-------TIESNF-GFPHKMSSVYSALLNISSPLVVFYRFHSSACLAEIWKHAYSKK 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Retinal <442..643 CDD:464722
Otopetrin 1015..1434 CDD:460840 111/466 (24%)
otpl-6NP_505195.1 Otopetrin 146..547 CDD:460840 111/466 (24%)
Blue background indicates that the domain is not in the aligned region.

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