DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and otpl-5

DIOPT Version :9

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_505196.2 Gene:otpl-5 / 185806 WormBaseID:WBGene00018478 Length:572 Species:Caenorhabditis elegans


Alignment Length:674 Identity:158/674 - (23%)
Similarity:288/674 - (42%) Gaps:199/674 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   838 SSQPALSGSQADGQLALMYHSHQLTNYPVLPAIKRTHRPSFVYPPMPRVKAGDALATLFSALYGK 902
            |:..:::.|.:||     :.||.    .:....|.|...:|             ...|.:|:|..
 Worm    19 STSTSVAMSTSDG-----FSSHD----DISQWTKNTDAKNF-------------CVNLMTAIYTL 61

  Fly   903 LLVVMGIAFPMAEVISTYIPPSF---YEVYYLYLYIGSMIFLLFMYATLIWGRPKLPVPIASPSK 964
            :|::  :|| :.|:..|:.....   |.::.:.:|..::.:.|::|..:::  |.:         
 Worm    62 ILIM--VAF-VIEISPTWRSEKMWLEYSIFCVLMYAVAVAYFLYLYLFVLY--PNV--------- 112

  Fly   965 SATKASGTDSMDESDTDSNSVHHRLPPPIPVRRPSLLSPLGRRDAHYGSFYLRMGAVAFG-IGSM 1028
                             .||..:.|......||..|..|:...:. .|:.|||:||:.|| :||:
 Worm   113 -----------------INSCIYYLFKKATPRRWLLDEPVFNGEG-AGTMYLRVGALFFGSMGSV 159

  Fly  1029 IYSGLEFGQYFELNPDTKCHNV-----LLALTPATRMAFIFIQMYFIFLNNEQIKVYRYKIIARF 1088
            :: |.|....|.   |.:.|.:     :||      :.|.|:||:||| :|.:|.:.|..|||:|
 Worm   160 LW-GTEILLCFF---DNQRHGIYVVKYILA------VIFTFMQMHFIF-SNSKISLKRSNIIAKF 213

  Fly  1089 GLMHMIGTNLAVWLNVLI--------------------QETKHEILT---------FYNPENRTL 1124
            ||||.:..||..||::.:                    .|||.||||         .:.|.::.|
 Worm   214 GLMHSVAVNLWNWLSICLIKSSIKHAKKEIKYTYEGSDNETKTEILTEMSYDFTTDSFGPHDKQL 278

  Fly  1125 RISHRIPGHSRGHAIIQHDPTAHLRVPRGLKGPYQIFECRRTNIIGTLVQDASPFLFPCTIEYSL 1189
            |            |||:                           :|:    :|..|..|.:|:||
 Worm   279 R------------AIIK---------------------------LGS----SSSILLTCLVEFSL 300

  Fly  1190 ICAAILYVMWRSISRPQTPTPQRPDMISSP--MKRSPHHYSVDCARAHKGLFVGILILVLTIISL 1252
            |.|.|.:::|::           .|..|..  .|:...|:..||:....|:|:.:.:.:::.:::
 Worm   301 IAAVICFIIWKN-----------DDSNSGEALKKKKKRHFRFDCSGTTVGIFLAVAVHIISAVAV 354

  Fly  1253 IIFFVLISRPEFVAMAVTEVTICELLIYGTATIATLVGMIQIRHLQYDAY-RSFSLDDILLVGAQ 1316
            .:..:| |:....:.|...|...::.::..|.:|.::...|:|.|||..: ....:|:|||:...
 Worm   355 GMHGIL-SKSNRDSAANLLVGYTDVFLFVVALLACILAFFQMRKLQYRLHAHGEVIDEILLIVGL 418

  Fly  1317 TGSFLY------------------NIFTVIAGHFTLRSDDMLVPINALASIVQTACQTMFILDAS 1363
            .|..:|                  :..|:::  ||||..::||             ||:|||.|:
 Worm   419 AGECVYSCAGMDLYINDKMIKEPASYITIVS--FTLRITEVLV-------------QTIFILIAT 468

  Fly  1364 RRQAVSPEHLRKKPGREIVTFMLVVNLAMWAISTLEKSRAE-SHPIQLNFYGLWAWTIITHVSMP 1427
            |.:..:..:...:||::::||:||.|:.::...|.|.:... ..||:|..    :::.:.:::.|
 Worm   469 RMRCYTQTNCYTEPGKQVITFLLVCNINLFIYHTFETTELNFGFPIKLPD----SYSAMLNIASP 529

  Fly  1428 LAIFYRFHSTVCLCEIWKRAYKLK 1451
            :.:||||||:.||.||||..|..|
 Worm   530 IVVFYRFHSSACLAEIWKHTYSRK 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Otopetrin 1015..1434 CDD:281218 116/475 (24%)
otpl-5NP_505196.2 Otopetrin 145..536 CDD:281218 116/475 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I2171
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 1 1.000 - - FOG0001932
OrthoInspector 1 1.000 - - mtm4740
orthoMCL 1 0.900 - - OOG6_105319
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X278
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.780

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