DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OtopLc and otpl-4

DIOPT Version :9

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_505202.2 Gene:otpl-4 / 185805 WormBaseID:WBGene00018477 Length:558 Species:Caenorhabditis elegans


Alignment Length:538 Identity:120/538 - (22%)
Similarity:210/538 - (39%) Gaps:138/538 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1014 FYLRMGAVAFGIGSMIYSGLEFGQYFELNPDTKCHNVLLALTPATR-----------MAFIFIQM 1067
            |:||:||:.|.||:::...:|               :.||...:.|           :.|...|:
 Worm    86 FFLRLGAIFFSIGAIVLWSIE---------------LFLAFAQSVRPWICILRTCLYIIFHVTQV 135

  Fly  1068 YFIFLNNEQIKVYRYKIIARFGLMHMIGTNLAVWLNVLIQETKHEILTFYNPENRTLRI--SHRI 1130
            .|:.::: :::.:.:::|..|||.|.|..||.:|.::.|.::     ...|.:|.|..|  .|..
 Worm   136 VFVSISH-RVEFHYHRMIVYFGLSHTIAVNLWIWASLCIAKS-----GIGNNQNETYHIVFDHHS 194

  Fly  1131 PG--HSRGHAIIQHDPTAHLRVPRGLKGPYQIFECRRTNIIGTLVQDASPFLFPCTIEYSLI--- 1190
            |.  ||....|:     .:|...:     |: :..|.....|:    .|.......:|:.||   
 Worm   195 PWVMHSTDQPIV-----VNLTFEK-----YE-YTLRTVKYFGS----TSIIFLTLNVEFCLIAFG 244

  Fly  1191 -CAAILY-VMWRSISRPQTPTPQRPDMISSPMKRSPHHYSVDCARAHKGLFVGILILVLTIISLI 1253
             |..:.| :.|.         |...|      .:..|:...|......|:.:|..:|:|:.:|  
 Worm   245 ACLCLFYTIAWE---------PSLHD------HKKNHYIGFDYRNTGIGMLLGFCMLILSCLS-- 292

  Fly  1254 IFFVLISRPEFVAMAVTEVTICELLIYGTATIAT--LVGMIQIRHLQYDAYRSFSLDD------- 1309
            :.|..|.|......|..||.....|.|...:|.|  :|.....:|:..:  :.|.:..       
 Worm   293 VAFGNILRDNDYQKAAGEVVGIFQLAYYLISILTCGIVFQCLFKHIILN--QEFVISPNRDLMPH 355

  Fly  1310 -------ILLVGAQTGSFLY---NIFTVIAGHFTLRSDDMLVPINALASIVQTACQTMFILDASR 1364
                   .||||. .|..:|   .:..||.|...|.:..:::     ||.:..|.:.:.      
 Worm   356 EKNINIIFLLVGV-CGEVMYCCMGLLGVIRGDQLLDTKGIVI-----ASFLTRAIEVLI------ 408

  Fly  1365 RQAVSPEHLRKKP---------GREIVTFMLVVNLAMWAISTLEKS-RAESHPIQLNFYGLWAWT 1419
             ||:...:|.||.         |::.:||::.:|:.::....:|.| |....|.:::...    .
 Worm   409 -QAILLFYLLKKGGSVEPCDTIGKQSITFLIALNMILFGFHAIEGSIRTYGFPTKIDDTS----K 468

  Fly  1420 IITHVSMPLAIFYRFHSTVCLCEIWKRAYKLKPTYMXEFARSRIQSIAQQQQFCEDLKTNLSYCY 1484
            :...:.:||.:|:|||.:||..||||..|.|.||     ::|..||:.:        .|.|....
 Worm   469 MFLKICLPLVVFFRFHCSVCFAEIWKVYYHLIPT-----SQSSRQSVIE--------NTTLDDPT 520

  Fly  1485 CSTTLAGGEL----ETVE 1498
            .|.|....|:    ||:|
 Worm   521 ASATPISAEVLISSETIE 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Otopetrin 1015..1434 CDD:281218 95/467 (20%)
otpl-4NP_505202.2 Otopetrin 87..483 CDD:281218 95/467 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 1 1.000 - - FOG0001932
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105319
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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