DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and otpl-2

DIOPT Version :9

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_001309627.1 Gene:otpl-2 / 183919 WormBaseID:WBGene00017034 Length:576 Species:Caenorhabditis elegans


Alignment Length:594 Identity:149/594 - (25%)
Similarity:267/594 - (44%) Gaps:140/594 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   897 SALYGKLLVVMGIAFPMAEVISTYIPPSF---YEVYYLYLYIGSMIFLLFMYATLIWGRPKLPVP 958
            ||||..:|.:  ||| :.|:..|:.....   |.::.:.:|:.::::..:.|..:|:  |.:   
 Worm    57 SALYALILTM--IAF-VIEISPTWRSQEMWLEYSIFGVLMYLFAILYFTYFYLFVIY--PNI--- 113

  Fly   959 IASPSKSATKASGTDSMDESDTDSNSV---HHRLPPPIPVRRPSLLSPLGRRDAHYGSFYLRMGA 1020
                                   .||:   .||......:.|..|..|:...:. .|:.|||:|.
 Worm   114 -----------------------INSIIYFLHRRGRIASLHRWLLEEPVFNGEG-AGTMYLRIGT 154

  Fly  1021 VAFG-IGSMIYSGLEFGQYFELNPDTKCHNVLLALTPATRMAFIFIQMYFIFLNNEQIKVYRYKI 1084
            :.|| :|:::|.......:|    ||: .|.:........:|||::||:||| :|.::.:.....
 Worm   155 LFFGSMGAVLYITEILLCFF----DTQ-RNGIYVTKYTLAVAFIYMQMHFIF-SNSKVLLKSSNA 213

  Fly  1085 IARFGLMHMIGTNLAVWLNVLI---------QETKH--EILTFYNPENRTLRISHRIPGHSRGHA 1138
            ||:|||||.:..||..||::.:         :|.||  :.|......|...:.|:.:..:|.|  
 Worm   214 IAKFGLMHSVAVNLWTWLSICLIKSDMKHSKKEMKHAEDGLKNQTATNVLAQWSYNLTTNSFG-- 276

  Fly  1139 IIQHDPTAHLRVPRGLKGPYQIFECRRTNIIGTLVQDASPFLFPCTIEYSLICAAILYVMWRSIS 1203
              .||......|..|                     .::..|..|.:|:|||.|.|.:::|::  
 Worm   277 --AHDKQLRTIVKMG---------------------SSANLLLTCLVEFSLIAAVICFIIWKN-- 316

  Fly  1204 RPQTPTPQRPDMISSPMKRSPHHYSVDCARAHKGLFVGILILVLTIISLIIFFVLI-SRPEFVA- 1266
              ..|.|...:  ..|.|:|   ...||.....|||..|.|.:::::.:.:..:.: ...|.|| 
 Worm   317 --DHPNPGNSE--KKPKKQS---VRFDCNGTSVGLFTAIFIHIISVVVIGLHGIYMKDHNEKVAD 374

  Fly  1267 --MAVTEVTICELLIYGTATIATLVGMIQIRHLQYDAY-RSFSLDDILLVGAQTGSFLYN----- 1323
              :..|:|.:..:|::     |.|:.:.|:|.|||.:: ....:|||||:....|..:|:     
 Worm   375 QLIGYTDVLMFVILLF-----ACLLALFQMRKLQYTSHVHGEVIDDILLIVGLAGECVYSCAAID 434

  Fly  1324 -------------IFTVIAGHFTLRSDDMLVPINALASIVQTACQTMFILDASRRQAVSPEHLRK 1375
                         ..|:||  |:||..:::|             ||:|||.|:|.:: ||.. .|
 Worm   435 LYVNEKLMDRPVPYITMIA--FSLRITEVIV-------------QTLFILIAARMRS-SPLS-NK 482

  Fly  1376 KPGREIVTFMLVVNLAMWAISTLEKSRAE-SHPIQLNFYGLWAWTIITHVSMPLAIFYRFHSTVC 1439
            :||::::||:|:.|:.::...|.|.:.:. ..|.:::    ..:|::..::.|:.:||||||:.|
 Worm   483 QPGKQVITFLLICNINLFIYHTFETTESSFGFPAKVS----EVYTVMLTIASPIVVFYRFHSSAC 543

  Fly  1440 LCEIWKRAY 1448
            |.||||..|
 Worm   544 LAEIWKNTY 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Otopetrin 1015..1434 CDD:281218 115/454 (25%)
otpl-2NP_001309627.1 Otopetrin 149..538 CDD:281218 115/454 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I2171
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 1 1.000 - - FOG0001932
OrthoInspector 1 1.000 - - mtm4740
orthoMCL 1 0.900 - - OOG6_105319
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X278
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.680

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