DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and otpl-1

DIOPT Version :9

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_001294440.1 Gene:otpl-1 / 181841 WormBaseID:WBGene00015035 Length:752 Species:Caenorhabditis elegans


Alignment Length:834 Identity:203/834 - (24%)
Similarity:339/834 - (40%) Gaps:176/834 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   707 THSVRVPTPTVP-------SSYAPPPPPDSGSSSSPVDRRRLFMAGVAPPIAAGAGSLMAMPAEP 764
            :|:...||.|:|       |....|...:..|.....||          |::.....:...|...
 Worm     9 SHTETTPTRTLPTRFERMASQMTCPVISEEASFGGEPDR----------PLSRCLSEIRPAPLPN 63

  Fly   765 AVAISPGRVSA-RSGSQHHVTIDESSLPSHKGNIQETPGPSGLIIGGGDGDGDRDIGGG-GGPDS 827
            ....||.|.|. |..|....|:|..:              ||..........:.|:..| ..|:.
 Worm    64 PRHQSPRRFSLFRRPSASRGTVDRRA--------------SGEFTTAWLKTSNFDLRQGVEEPEE 114

  Fly   828 SDPPSSPGGSSSQP-------ALSG-------SQADGQLALMYHSHQLTNYPVLPAIKRTHRPSF 878
            ...|....|..:|.       ..||       ::.|...::..:..:..|...|...|.......
 Worm   115 QQEPEEAMGVPTQADQLDHVRFTSGIERPVQLTRIDSNYSISENEEESENGSTLDIDKTPESAET 179

  Fly   879 VYPPMPRVKAGDALATLFSALYGKLLVVMGIAFPMAEVISTYIPPSFYE---VYYLYLYIGSMIF 940
            .:  :...||..:|.|..:..|...|.:..:...:|.:::........:   ::.||:|.||::|
 Worm   180 TW--LRDKKAKTSLLTACTVFYALFLTIFSLVLELAHLLNDEESRKLNKKDIIFGLYMYGGSLLF 242

  Fly   941 LLFMYATLI----W-----------GRPKLPVPIASPSKSATKASGTDSMDESDTDSNSVHHRLP 990
            ..:||..|:    |           |..:....:|..|.|.:.|:.|                  
 Worm   243 FFYMYIVLLLNPRWYSTMEYLKKLFGICRTSPKVAPSSDSLSSAAAT------------------ 289

  Fly   991 PPIPVRRPSLLSPLGRRDAHYGSFYLRMGAVAFGI-GSMIYSGLEFGQYFELNPDTKCHNVLLAL 1054
                ||:.:..||..      ||.:||:|:|.||: |.:.|:.|.|  ..||:|:  | :.|...
 Worm   290 ----VRKVTHSSPSA------GSLFLRLGSVVFGVTGVVYYAFLVF--LCELDPN--C-SALSTS 339

  Fly  1055 TPATRMAFIFIQMYFIFLNNEQIKVYRYKIIARFGLMHMIGTNLAVWLNVLIQE---TKHEILTF 1116
            .....:.||||||:|||. |.::.:....::||.|.||::..||..|:..::.|   .:.||...
 Worm   340 LDVCAILFIFIQMHFIFC-NWKLSITGSHMVARVGTMHLVAANLWTWIRYVLMEEGVMEKEIREV 403

  Fly  1117 YNPENRTLRISHRIPGH------------SRGHAIIQ------HDPTAHLRVPRGLKGPYQIFEC 1163
            :|         ||.|||            |..:::.|      |: ..|.. .:.:.|..|..||
 Worm   404 FN---------HRPPGHNYMRSNSSDSSSSAENSMEQFLGDGSHE-DEHFE-KKIMPGSCQAVEC 457

  Fly  1164 RRTNIIGTLVQDASPFLFPCTIEYSLICAAILYVMWRSISRPQTPTPQRPDMISSPMKRSPHHYS 1228
                |:|::    |..:|...:|||||.||::|::||:|.        |.|..|:.:||. |...
 Worm   458 ----ILGSM----SEIMFTSIVEYSLIAAAVMYIVWRNIG--------RQDQGSTYVKRK-HQIR 505

  Fly  1229 VDCARAHKGLFVGILILVLTIISLIIF--FVLISRPEFVAMAVTEVTICELLIYGTATIATLVGM 1291
            |||::...|||:|:..|.:|..|::::  |.::::.:..|..   ....::..|..:||..|..:
 Worm   506 VDCSKTTTGLFLGLAFLAVTFTSMVVYYGFTMMNKSQSAAFV---YAFTDMFQYVLSTIGVLTAI 567

  Fly  1292 IQIRHLQYDAYRSFS------------LDDILLVGAQTGSFLYNIFTVI--AGHFTLRSDDMLVP 1342
            .|:|.|:|     |:            ||.|||.....|..:|::..::  .|.....:...::.
 Worm   568 YQMRALKY-----FNKKTKLQNSDQELLDQILLSIGLVGELIYSVAGLVGLTGEKQWTNFSFILL 627

  Fly  1343 INALASIVQTACQTMFILDASRRQAVSPEHLRKKPGREIVTFMLVVNLAMWAISTLEKSRAESHP 1407
            ...:..::|...|| |:|..:|...:..||...:||::.:||:|..|||::.::..|..:|....
 Worm   628 FVHIFRLIQVGTQT-FLLHVARSVRMGCEHREAQPGKQAITFLLTANLAIFFMNLFESEKAGVSE 691

  Fly  1408 IQLNFYGLWAWTIITHVSMPLAIFYRFHSTVCLCEIWKRAYKLKPTYMXEFARS 1461
            :.:.:||..:|..:.....||.|||||||:||..||||..|..|...:...|.|
 Worm   692 MIIEYYGKRSWVFLVRSFSPLTIFYRFHSSVCFAEIWKNVYAAKTHLVHNSATS 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Otopetrin 1015..1434 CDD:281218 126/456 (28%)
otpl-1NP_001294440.1 Otopetrin 304..718 CDD:281218 126/456 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I2171
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 1 1.000 - - FOG0001932
OrthoInspector 1 1.000 - - mtm4740
orthoMCL 1 0.900 - - OOG6_105319
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3542
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.910

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