DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and otop2

DIOPT Version :9

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:XP_017944835.2 Gene:otop2 / 100496174 XenbaseID:XB-GENE-6045877 Length:588 Species:Xenopus tropicalis


Alignment Length:673 Identity:146/673 - (21%)
Similarity:251/673 - (37%) Gaps:225/673 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   879 VYPPMP---RVKAGDALAT-------------LFSALYGKLLVVMGIAFPMA-----------EV 916
            |.||.|   ::..|:..|.             |.|.|.|..:|::|.|...:           ||
 Frog    31 VPPPDPTFEKISLGELSAVSAKSPEVWKKGGRLLSGLLGINIVLLGCALVSSGAFTDVSVAEREV 95

  Fly   917 ISTYIPPSFYEVYYLYLYIGSMIFLLFMYATLIWGRPKLPVPIASPSKSATKASGTDSMDESDTD 981
            :|           :|.:.:|  :..::|.:.|:|                               
 Frog    96 LS-----------FLSVLMG--LSSIWMVSYLLW------------------------------- 116

  Fly   982 SNSVHHRLPPPIPVRRPSLLSPLGRRDAHYGSFYLRMGAVAFGIGSMIYSGLEFGQYFELNPDTK 1046
             .|.|                ....:|:|.|..:||.|.|.||:.:::...::.|:...|   ..
 Frog   117 -TSKH----------------KYNLKDSHAGPIWLRGGLVLFGVCTLVLDVMKIGKSVTL---IH 161

  Fly  1047 CHNVLLALTPATRMAFIFIQMYFIFLNNE---QIKVYRYKIIARFGLMHMIGTNLAVWLNVLIQE 1108
            |.:.:..:.|..:..|:.||.||::::.:   ||    :..:.|.|||..:.||||||:..:..|
 Frog   162 CESPVKIVHPVIQGVFVVIQTYFLWVSCKDCAQI----HMNLTRCGLMITLSTNLAVWMAAVTDE 222

  Fly  1109 TKHEILTFYNPENRTLRISHRIPGHSRGHAIIQHDPTAHLRVPRGLKGPYQIFECRRTNIIGTLV 1173
            :.|              ::|.:      :..:.:..:|.:. ||...|.....|| .|::..|. 
 Frog   223 SLH--------------LTHEL------NMDVNYTVSATVG-PRAAGGESHGCEC-ATHVCKTF- 264

  Fly  1174 QDASPFLFPCTIEYSLICAAILYVMWRSISRPQTPTPQRPDMISSPMKRSPHHYSVDCARAHK-- 1236
            |:...:|:|..|||||..:|:.||||:::.|..                |.||::     .||  
 Frog   265 QNGYYYLYPFNIEYSLFASAMSYVMWKNVGRVM----------------SGHHHT-----QHKFK 308

  Fly  1237 ------GLFVGILILVLTIISLIIFFVLISRPEFVAMAVTEVTICELLIYGTATIATLVGMIQIR 1295
                  ||..||.:.|..:...|::.:.:...|..:.|:|...|..:......::.:|.|.|..|
 Frog   309 TRNLFVGLICGIGVFVAGLGVFIVYKIEVDVEETRSQAITMFYIFNITALSLMSVVSLAGTIIYR 373

  Fly  1296 HLQYDAYR----SFSLDDILLVGAQTGSFLYNIFTVIA-------GHFTLRSDDMLVPINALASI 1349
            ..:.|...    :.:||.:||:||..|.:..:.|:::|       |..     ..|:.:|||..|
 Frog   374 FYKRDMDNHKNPTRTLDVVLLLGAALGQYCISFFSIVAMVALQPGGQL-----HTLILVNALLLI 433

  Fly  1350 VQTACQTMFILDASRRQAVS-------------PEHL---------------------------- 1373
            ||...|..||::...||..:             |.|:                            
 Frog   434 VQHTIQNTFIIEGLHRQPHANSHPAADLQEKDQPPHVYINPAATVSHSDHSPSSHEKHEHELETK 498

  Fly  1374 -----------------RKKPGREIVTFMLVVNLAMWAISTLEKSRAESHPIQLNFYGLWAWTII 1421
                             |:|..:||..|:||.|:..|.:..........:.::||||| :.|..|
 Frog   499 HHGTPTGFPECHSKSDWRRKALKEISLFLLVSNIIFWIMPAFGARPQFDNRLELNFYG-YTWVAI 562

  Fly  1422 THVSMPLAIFYRFHSTVCLCEIW 1444
            .::.:|..||||.|:...|.|::
 Frog   563 VNIGLPFGIFYRMHAIASLVEVY 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Otopetrin 1015..1434 CDD:281218 116/498 (23%)
otop2XP_017944835.2 Otopetrin 134..574 CDD:397346 115/496 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H27803
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9424
Panther 1 1.100 - - LDO PTHR21522
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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