DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and otop1

DIOPT Version :9

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:XP_012811170.1 Gene:otop1 / 100495027 XenbaseID:XB-GENE-876999 Length:589 Species:Xenopus tropicalis


Alignment Length:553 Identity:114/553 - (20%)
Similarity:210/553 - (37%) Gaps:156/553 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   996 RRPSLLSPLGRRDAHYGSFYLRMGAVAFGIGSMIYSGLEFGQYFELNPDTKCHNVLLALTPATRM 1060
            |..|:...:..:|...|:.:||.|...|.:.::|....:.|.|...   ::|.::...:.|.|..
 Frog    92 RSQSIRRSIIEKDTDAGARWLRCGITLFAVITLILDSFKIGYYIGY---SECLSITEGIFPVTHT 153

  Fly  1061 AFIFIQMYFIFLNNEQIKVYRYKIIARFGLMHMIGTNLAVWLNVLIQETKHEILTFYNPENRTLR 1125
            ....:|:||::.:.:.| :..:|.:.||||:|.:.|||.:|.|.::.|:||| |..:.....||.
 Frog   154 IHTLLQVYFLWFHAKDI-IQSFKTLERFGLIHAVFTNLLLWANGILTESKHE-LNEHKERLITLG 216

  Fly  1126 ISHRIPGHSRGHAIIQHDPTAHLRVPRGLKGPYQIFECRRTNIIGTLVQDASPFLFPCTIEYSLI 1190
            .|:....|        |.|                 ||..|:.:.::......:|:|.||||.::
 Frog   217 FSNITMDH--------HTP-----------------ECNCTSSVCSIFSQGIYYLYPFTIEYHIL 256

  Fly  1191 CAAILYVMWRSISRPQTPTPQRPDMISSPMKRSPHHYSVDCARAH-------KGLFVGILILVLT 1248
            .:.:|||:|::|.|                 ...||..   .:.|       .|..:|:::|..|
 Frog   257 ASTMLYVLWKNIGR-----------------TVKHHQQ---QKIHFKFHGITIGTILGLIVLTTT 301

  Fly  1249 IISLIIFFVLISRPE---------FVAMAVTEVTICELLIYGTATIATLVGMIQIRHLQYDAYRS 1304
            :..|:::.:.|.|.:         |...|:|.:|    |:..:|.|..::..|:.:.|......:
 Frog   302 VAVLVVYLIQIGRSKSKSELALNMFYLYAITVLT----LMCTSAIIGLIIYRIENKSLDDSESPA 362

  Fly  1305 FSLDDILLVGAQTGSFLYNIFTVIAGHFTLRSDDML---VPINALASIVQTACQTMFILDASRRQ 1366
            ..||..||||:..||:|.:..:::|........|..   :|.:.|. |::...|.:||::...|:
 Frog   363 KKLDSDLLVGSACGSWLISWGSILAIICAETHPDYTWYNLPYSILV-IIEKYIQNLFIIECIHRK 426

  Fly  1367 ----------------------------------------------------------------- 1366
                                                                             
 Frog   427 EEEPTDDHSVERIFSVSARSTISLASSSYDVFSDSVTICNKEFPYISNSEVPIGEDCAEEQRNQD 491

  Fly  1367 ---------------AVSPEHLRKKPG--REIVTFMLVVNLAMWAISTLEKSRAESHPIQLNFYG 1414
                           |..|..|.||..  :.|..|:.:.|:::|............:.::...:|
 Frog   492 NNNSIRLTPCKVSIHATRPAKLNKKRRVLKNIAAFLFLCNISLWIPPAFGCRPQYDNGLEEIVFG 556

  Fly  1415 LWAWTIITHVSMPLAIFYRFHSTVCLCEIWKRA 1447
            ...|..:.:::||.:||||.||...|.|::.:|
 Frog   557 FEPWITVVNLAMPFSIFYRMHSASSLFEVYCKA 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Otopetrin 1015..1434 CDD:281218 104/519 (20%)
otop1XP_012811170.1 Otopetrin 112..435 CDD:367383 88/377 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9424
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3542
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.050

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