DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-epsilon and zgc:152904

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001070212.1 Gene:zgc:152904 / 767777 ZFINID:ZDB-GENE-060929-856 Length:809 Species:Danio rerio


Alignment Length:363 Identity:78/363 - (21%)
Similarity:135/363 - (37%) Gaps:58/363 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 EFTDVIENITVPA---------------GRNVKLACSVKNLGSYKVAWM-------HFEQSAILT 95
            :|.|::..:.||.               ..:|...|........:|.|.       |.||..:.|
Zfish   166 DFRDIVVQVNVPPVLSVPQQSFNATADYQESVTFTCVTSGSPDPQVTWYWKGHAIEHSEQYVLNT 230

  Fly    96 VHNHVITRNPRISVTHDKHDKHRTWFLHINNVQEEDRGRYMCQI-NTVTAKTQYGFVKVVVPPNI 159
            ::....|                   |.:.|:::.|.|.|||:. |...:.....|:||.|.|:|
Zfish   231 MNGGKST-------------------LTVKNIKQTDGGPYMCRASNKAGSSESQLFLKVFVQPHI 276

  Fly   160 DDALTSSDIIVREGDNVTLRCKAKGSPEPTIKWKR-DDGNKIVINK-----TLEVHDLETDS-LE 217
            ...   .::...||....:.|.|:|.|.|.|.|:| .||:.....:     .:||......| |.
Zfish   277 TQL---RNVTAVEGSAAMISCTAEGEPLPEISWRRASDGHSFTDGEKSKDGRVEVRGRHGKSMLT 338

  Fly   218 LERISRLHMGAYLCIASNGVPPSVSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANPTS 282
            :..:.....|.:.|.|.:.: ....|.:.:.::::|.......:.....|..:.:.|.:::||.:
Zfish   339 ISGVQLSDWGRFDCEALSRI-GGHQKSMFLDIEYAPKFQTNQSIFYSWEGNPVNISCEVKSNPAA 402

  Fly   283 LNYWTRENDQMITESSKYKTETIPGHPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKL 347
            ...|.||.   .|.||: .|..|..| |......|.:|.|...|:|.|.|.|:|..|.......|
Zfish   403 TMLWRRER---FTISSQ-GTSNIRIH-STDGRSLLEVTPVSDRDFGRYNCTARNNIGARYQEFIL 462

  Fly   348 YMSSPPTTQPPPTTTTLRRTTTTAAEIALDGYINTPLN 385
            ..:..|::......|.:.:...|.:.:..|.:...|::
Zfish   463 AQADVPSSPYSVRMTAVSQRMATVSFMKPDSHGGVPIS 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 22/118 (19%)
Ig 69..139 CDD:143165 16/76 (21%)
IG_like 165..249 CDD:214653 20/90 (22%)
IGc2 172..237 CDD:197706 19/71 (27%)
IG_like 267..348 CDD:214653 24/80 (30%)
Ig 270..339 CDD:299845 22/68 (32%)
zgc:152904NP_001070212.1 Ig 1..81 CDD:299845
IG_like 2..80 CDD:214653
IGc2 97..158 CDD:197706
Ig 177..273 CDD:299845 21/114 (18%)
I-set 184..270 CDD:254352 18/104 (17%)
Ig 272..369 CDD:299845 23/100 (23%)
I-set 274..367 CDD:254352 22/96 (23%)
IG_like 385..462 CDD:214653 24/81 (30%)
IGc2 386..454 CDD:197706 23/72 (32%)
FN3 468..561 CDD:238020 5/33 (15%)
fn3 <591..650 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.