DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and lsamp

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001034921.1 Gene:lsamp / 664692 ZFINID:ZDB-GENE-090108-1 Length:333 Species:Danio rerio


Alignment Length:305 Identity:98/305 - (32%)
Similarity:137/305 - (44%) Gaps:31/305 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VIS-EDPEFTDVIENITVPAGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRIS-V 109
            ||| |....||   |||:..|....:.|.|.:..| ||||::  :|.|:.......:.:||:. |
Zfish    25 VISVESQRSTD---NITIRQGDTTVIRCYVDDKVS-KVAWLN--RSNIIFAGEDKWSLDPRVELV 83

  Fly   110 THDKHDKHRTWFLHINNVQEEDRGRYMCQINT-VTAKTQYGFVKVVVPPNIDDALTSSDIIVREG 173
            |..:.:    :.|.|..|...|.|.|.|.|.| ..:||...::.|.||..|  ...|.||.|.||
Zfish    84 TQGQLE----YSLRIQKVDVFDEGPYTCSIQTKQQSKTSQVYLIVQVPAII--YKVSEDITVNEG 142

  Fly   174 DNVTLRCKAKGSPEPTIKWKRDDGNKIVINKTLEVHDLETDSLELERISRLHMGAYLCIASNGVP 238
            .||.|.|.|.|.|:|.|.|:       ::|.:.|..|: .:.||:..:.|...|.|.|.|||.|.
Zfish   143 SNVALTCLANGRPDPAITWR-------LLNPSAEALDV-GEYLEISGVVRSQAGRYECKASNDVS 199

  Fly   239 PSVSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANPTSLNYWTRENDQMITESSKYKTE 303
            ....|.:.|.|::.|.: ...:.....:|....|.|...|.|.....|.|  |:....||:..|.
Zfish   200 TPDVKYVNVVVNYPPYI-KDVRSSETAVGQAGVLHCEASAVPQPEFEWYR--DERRLSSSQSLTI 261

  Fly   304 TIPGHPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKLY 348
            .:.|..:.     |.:.||...|||||.|||.|..|..:.::.||
Zfish   262 QVSGSRTV-----LVVANVTEEDYGNYTCVATNRLGVHNASVFLY 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 29/97 (30%)
Ig 69..139 CDD:143165 20/70 (29%)
IG_like 165..249 CDD:214653 31/83 (37%)
IGc2 172..237 CDD:197706 24/64 (38%)
IG_like 267..348 CDD:214653 25/80 (31%)
Ig 270..339 CDD:299845 23/68 (34%)
lsampNP_001034921.1 Ig 34..124 CDD:299845 30/99 (30%)
IG_like 36..124 CDD:214653 28/94 (30%)
IG_like 134..197 CDD:214653 27/70 (39%)
IGc2 141..199 CDD:197706 24/65 (37%)
I-set 213..300 CDD:254352 26/94 (28%)
Ig 231..298 CDD:143165 24/73 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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