DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and obsl1b

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_021334748.1 Gene:obsl1b / 606585 ZFINID:ZDB-GENE-050809-29 Length:2929 Species:Danio rerio


Alignment Length:374 Identity:72/374 - (19%)
Similarity:121/374 - (32%) Gaps:88/374 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 NVISEDPEFTDVIENITVPAGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVT 110
            :|....|.|......:.|.:|.:..|.|.:.......|.|..         :|..|....|..|.
Zfish     2 DVFGGAPRFLAYPRPVVVQSGTDAVLKCQIGGDPRPAVIWER---------NNEKIHPEGRYRVF 57

  Fly   111 HDKHDKHRTWFLHINNVQEEDRGRYMCQINTVTAKTQYGFVKVVVPPNIDDALTSSDIIVRE--- 172
            .|.:    .:.|.|.:|..||.|:|:|:......:| |....:.|...      :.::.|||   
Zfish    58 EDGN----VYNLIITSVTMEDSGQYICKAKNCIGET-YAAATLKVEGE------AQEMEVREENK 111

  Fly   173 --------------GDNVTLRCKAKGSPEPTIKWKRDDGNKI--VINKT---LEVHDLETDSLEL 218
                          |::....||..|:|.|.:.|:: ||.|:  :...|   :...|.....|::
Zfish   112 PRFLIKPLSTRVGRGEDAMFSCKLWGNPRPEVMWEK-DGKKLNEIFESTHFSISYQDGGWFQLKI 175

  Fly   219 ERISRLHMGAYLCIASNGVPPSVSKRIKVSVDFSP-------------MVWIPHQ---------- 260
            .:......|.|.|.|.|....|::..: :.||..|             ..|..||          
Zfish   176 FKTRAPDGGVYTCKARNEFGESLAGAV-LLVDAGPGHEDEGNRNGYTNGHWKAHQGKQRSGRQVA 239

  Fly   261 ---------------LVGIPIGFNITLECFIEANPTSLNYWTRENDQMITESSKYKTETIPGHPS 310
                           :..:..|.:....|::...|.....| |::.::|....:|..     :..
Zfish   240 TRLKDDPLPNSAKVKMFAVTEGKHAKFRCYVTGKPKPEILW-RKDGKLILSGRRYLL-----YED 298

  Fly   311 YKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSPPTTQPPP 359
            .:....|.:...:..|.|.|.|.|.|..|.....:.|.:..||.....|
Zfish   299 REGYFTLKVLYCKQQDNGVYVCSASNTAGQTLSAVHLIVKEPPVRFKQP 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 21/95 (22%)
Ig 69..139 CDD:143165 17/69 (25%)
IG_like 165..249 CDD:214653 22/105 (21%)
IGc2 172..237 CDD:197706 19/86 (22%)
IG_like 267..348 CDD:214653 15/80 (19%)
Ig 270..339 CDD:299845 13/68 (19%)
obsl1bXP_021334748.1 I-set 8..97 CDD:254352 23/102 (23%)
I-set 112..205 CDD:254352 19/94 (20%)
I-set 257..337 CDD:254352 16/85 (19%)
I-set 343..413 CDD:333254 1/5 (20%)
I-set 434..>497 CDD:333254
FN3 522..606 CDD:238020
I-set 622..>687 CDD:333254
Ig 720..>784 CDD:325142
Ig 819..889 CDD:325142
Ig_3 908..967 CDD:316449
Ig 1004..1059 CDD:319273
Ig 1319..1387 CDD:319273
Ig 1411..1468 CDD:319273
Ig 1503..1559 CDD:319273
I-set 1589..1655 CDD:333254
I-set 1684..1740 CDD:333254
Ig 1779..>1832 CDD:319273
IG_like 1862..1932 CDD:214653
IG_like 1960..2030 CDD:214653
IG 2051..2121 CDD:214652
IG 2136..2211 CDD:214652
I-set 2217..2298 CDD:333254
I-set 2307..2390 CDD:333254
I-set 2397..2466 CDD:333254
I-set 2485..2559 CDD:333254
I-set 2574..2655 CDD:333254
I-set 2663..2746 CDD:333254
I-set 2753..2835 CDD:333254
I-set 2842..2925 CDD:333254
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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