DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and Gpa33

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_067623.1 Gene:Gpa33 / 59290 MGIID:1891703 Length:319 Species:Mus musculus


Alignment Length:263 Identity:59/263 - (22%)
Similarity:115/263 - (43%) Gaps:43/263 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GNAGNVGGSTLNNVISEDPEFTDVIENITVPA-GRNVKLACSVKNLGSYKVAWMHFEQSAILTVH 97
            |.||:|........::.|....:..::|...| ||:|.|.|:.....|.:..::.::: .:.:..
Mouse     3 GKAGSVVWMFCAIWVAADALTVETTQDILRAARGRSVTLPCTYNTYVSDREGFIQWDK-LLRSQT 66

  Fly    98 NHVITRN-------------PRISVTHDKHDKHRTWFLHINNVQEEDRGRYMCQIN-----TVTA 144
            ..|:|.|             .|:.|::|....:.:  :.|:.:..:|.|.|.|.::     .|.|
Mouse    67 ERVVTWNFVTKKYIYGNRYENRVRVSNDAELSNAS--ITIDQLTMDDNGTYECSVSLMSDQDVNA 129

  Fly   145 KTQYGFVKVVVPPNIDDALTSSDIIVREGDNVTLRC-KAKGSPEPTIKWKRDDGNKIVINKTLEV 208
            |::...: |:|||:..|.....::::  |:|:.|.| .|:|||.|...||..:...   .:....
Mouse   130 KSRVRLL-VLVPPSKPDCSIQGEMVI--GNNIQLTCHSAEGSPSPQYSWKSYNAQN---QQRPLT 188

  Fly   209 HDLETDSLELERISRLHMGAYLCIASNGV------------PPSVSKRIKVSVDFSPMVWIPHQL 261
            ..:..:.|.|:.||....|.|:|.:||.|            |||::  |.:....:..|::...:
Mouse   189 QPVSGEPLLLKNISTETAGYYICTSSNDVGIESCNITVAPRPPSMN--IALYAGIAGSVFVALII 251

  Fly   262 VGI 264
            :|:
Mouse   252 IGV 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 23/114 (20%)
Ig 69..139 CDD:143165 15/82 (18%)
IG_like 165..249 CDD:214653 25/96 (26%)
IGc2 172..237 CDD:197706 20/65 (31%)
IG_like 267..348 CDD:214653
Ig 270..339 CDD:299845
Gpa33NP_067623.1 V-set 31..138 CDD:284989 21/110 (19%)
IG_like 31..137 CDD:214653 21/109 (19%)
IG_like 151..226 CDD:214653 21/79 (27%)
IGc2 154..218 CDD:197706 20/68 (29%)
Shisa <240..>262 CDD:290619 2/15 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..319
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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