DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-epsilon and CG34353

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001287571.1 Gene:CG34353 / 5740590 FlyBaseID:FBgn0085382 Length:581 Species:Drosophila melanogaster


Alignment Length:431 Identity:111/431 - (25%)
Similarity:179/431 - (41%) Gaps:68/431 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 STLNNVISEDPEFTDVIENITVPAGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPR 106
            |..:.:...:|.|....|......|..:.|.|.|.|..:|.|||.  ...||||..:..:|.:||
  Fly    76 SAQSMMTKNEPMFISRSETFKFITGETIVLPCEVANTDTYVVAWK--RGIAILTAGSVKVTPDPR 138

  Fly   107 ISVTHDKHDKHRTWFLHINNVQEEDRGRYMCQINTVTAKTQYGFVKVVVPPNIDDALTSSDIIVR 171
            :.:.:.       :.|.|.:....|.|.|:|||.|:..:.....|:::|||.|....|...:.|:
  Fly   139 VRLVNG-------FNLQIRDALPTDAGDYICQIATMDPREITHTVEILVPPRIHHISTGGHLQVK 196

  Fly   172 EGDNVTLRCKAKGSPEPTIKWKRDDGNKIVINKTLEVHDLETDSLELERISRLHMGAYLCIASNG 236
            :|.:|.:.|.|.|:|.|.:.|.|.  |.|:.|...::|   :..|.:|.:.|...|.|:|.|:|.
  Fly   197 KGSSVRIECSATGNPMPNVTWSRK--NNILPNGEEKLH---SHVLSIENVDRHKGGVYICTANNR 256

  Fly   237 VPPSVSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANPTSLNYWTRENDQMITESSKYK 301
            |....|.::.:.|.|||.:.:...:|....|...||.|.:.........|.::..|:.| :.::.
  Fly   257 VGQPASSQVVLHVLFSPEISVERPVVFSGEGHEATLVCIVHGETQPEVIWFKDTMQLDT-TERHI 320

  Fly   302 TETIPGHPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKL-------YMSSPPTTQPPP 359
            .||.....:      |.|..|...|:|||.|||:|..|.....::|       ..:|||.:|...
  Fly   321 METRGSRHT------LIIRKVHPQDFGNYSCVAENQLGKARKTLQLSGKPNVAVFNSPPISQYKD 379

  Fly   360 TTTTLRRTTTTAAEIALDGYINTPLN----------------GNGIGIVGEGPTNSVIASGKSSI 408
                 |...:.|.:      .::|:.                ||.|    :..::|...|..||.
  Fly   380 -----RYNISWAVD------SHSPIEEYKLSFRKLPQGHEVVGNAI----DSSSSSSSMSSSSSQ 429

  Fly   409 KYLSNL--NEIDKSKQKLTGSSPKGFDWSKGKSSGSHGNLM 447
            .|.|.|  :.|..:...|:|.|..|       |...:||::
  Fly   430 MYGSGLHAHRIGSNMGGLSGLSGSG-------SYSGYGNVI 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 27/95 (28%)
Ig 69..139 CDD:143165 21/69 (30%)
IG_like 165..249 CDD:214653 24/83 (29%)
IGc2 172..237 CDD:197706 21/64 (33%)
IG_like 267..348 CDD:214653 22/87 (25%)
Ig 270..339 CDD:299845 19/68 (28%)
CG34353NP_001287571.1 IG_like 100..180 CDD:214653 26/88 (30%)
Ig 103..177 CDD:143165 24/82 (29%)
IG_like 191..269 CDD:214653 24/82 (29%)
IGc2 198..258 CDD:197706 21/64 (33%)
I-set 273..360 CDD:254352 23/93 (25%)
Ig 290..359 CDD:143165 20/75 (27%)
FN3 <466..524 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
32.810

Return to query results.
Submit another query.