DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and igsf9bb

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_009293693.1 Gene:igsf9bb / 569554 ZFINID:ZDB-GENE-091112-15 Length:1439 Species:Danio rerio


Alignment Length:391 Identity:103/391 - (26%)
Similarity:156/391 - (39%) Gaps:72/391 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 IASSVALSTDTGSEGNAGNVGGSTLNNVISEDPEFTDVIENITVPAGRNVKLACSV---KNLGSY 81
            :.:||..:..|.::|..|          :.|:|:|      :|..||..|.|.|.|   .|...|
Zfish     8 LIASVFSTRGTAAQGAHG----------VREEPQF------VTSRAGETVILGCDVVHPLNGQPY 56

  Fly    82 KVAWMHFEQSAILTVH-----NHVITRNPRISVTHDKHDKHRTWFLHINNVQEEDRGRYMCQINT 141
            .|.|..|.......::     .||   :|..:.....|.|..   |.|..|:.||:|.|.|::  
Zfish    57 VVEWFKFGVPIPFFINFRFYPPHV---DPEYAGRASLHGKSS---LRIERVRSEDQGWYECKV-- 113

  Fly   142 VTAKTQY------GFVKVVV--PPNIDDALTSSDIIVREGDNVTLRCKAKGSPEPTIKWKRDDGN 198
            :..:.||      .:|.:.|  ||...|. ....:..:||.::||.|.|.|:|:|::.|.| :||
Zfish   114 LMLEQQYHTFHNGSWVHLTVNAPPTFTDT-PPQYVEAKEGGSITLSCTAFGNPKPSVSWLR-EGN 176

  Fly   199 KIVINKTLEVHDLETDSLELERISRLHMGAYLCIASNGVPPSVSKRIKVSVDFSPMVWIPHQLVG 263
            .:..:...:|.|   .||.|..|||...|||.|.|.:....:| ...::.|...|.:..|.:.:.
Zfish   177 PVQDSTKYKVSD---GSLTLVSISREDRGAYTCRAYSEQGEAV-HTTRLLVQGPPFIVSPPENIT 237

  Fly   264 IPIGFNITLECFIEANPTSLNY-WTRENDQMITESSKYKTETIPGHPSYKATMRLTITNVQSSDY 327
            :.|..:....|..||.|.:|.| |..|.|.:..::...:..:|....|      |.|:.|:..|.
Zfish   238 VNISQDAFFTCQAEAYPGNLTYTWFWEEDNVFFKNDLKRRVSILIDGS------LIISQVKPEDA 296

  Fly   328 GNYKCVAKNPRGDMDGNIKLYMSSPP------TTQPPPTTTTLRRTTTTAAEIALDGYINTPLNG 386
            |.|.|...|..|           .||      |...|.....:......|  |.|.|||..|::.
Zfish   297 GKYTCSPSNSLG-----------RPPSASAYLTVHYPARVINMPPVIYVA--IGLPGYIRCPVDA 348

  Fly   387 N 387
            |
Zfish   349 N 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 28/109 (26%)
Ig 69..139 CDD:143165 22/77 (29%)
IG_like 165..249 CDD:214653 27/83 (33%)
IGc2 172..237 CDD:197706 26/64 (41%)
IG_like 267..348 CDD:214653 20/81 (25%)
Ig 270..339 CDD:299845 19/69 (28%)
igsf9bbXP_009293693.1 IG_like 30..113 CDD:214653 27/94 (29%)
Ig 41..113 CDD:143165 22/77 (29%)
IG_like 144..223 CDD:214653 27/83 (33%)
IGc2 151..208 CDD:197706 25/60 (42%)
I-set 227..319 CDD:254352 25/108 (23%)
Ig <263..319 CDD:299845 15/72 (21%)
Ig_2 326..414 CDD:290606 8/26 (31%)
IG_like 329..403 CDD:214653 8/23 (35%)
IG_like 424..504 CDD:214653
Ig 440..504 CDD:299845
FN3 509..604 CDD:238020
FN3 620..704 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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