DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and igsf9ba

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_009289969.2 Gene:igsf9ba / 567389 ZFINID:ZDB-GENE-060503-729 Length:1475 Species:Danio rerio


Alignment Length:530 Identity:118/530 - (22%)
Similarity:187/530 - (35%) Gaps:166/530 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 IASSVALSTDTGSEGNAGNVGGSTLNNVISEDPEFTDVIENITVPAGRNVKLACSVKN-----LG 79
            :.:||..:..|.::|..|          :.|:|:|      :|..||.:|.|.|.|.:     ..
Zfish     8 LIASVFSTRGTAAQGAHG----------VREEPQF------VTARAGESVVLGCDVSHPLNGQQT 56

  Fly    80 SYKVAWMHFEQSAILTVH-----NHVITRNPRISVTHDKHDKHRTWFLHINNVQEEDRGRYMCQI 139
            .|.|.|..|.......::     .||   :|..:.....|.|..   |.|..|:.||:|.|.|::
Zfish    57 PYVVEWFKFGVPIPFFINFRFYPPHV---DPEYAGRASLHGKAS---LQIEQVRSEDQGWYECRV 115

  Fly   140 NTVTAKTQY------GFVKVVV--PPNIDDALTSSDIIVREGDNVTLRCKAKGSPEPTIKWKRDD 196
              :..:.||      .:|.:.|  ||...|. ....:..|||.::||.|.|.|:|:|.:.|.| :
Zfish   116 --LMLEQQYDTFHNGSWVHLTVNAPPTFSDT-PPQYVEAREGGSITLTCTAFGNPKPVVTWLR-E 176

  Fly   197 GNKIVINKTLEVHDLETDSLELERISRLHMGAYLCIASNGVPPSVSKRIKVSVDFSPMVWIPHQL 261
            |:::...:...|.|   .||.::.|:|...|||.|.|.:....:: ...::.|...|.:..|.:.
Zfish   177 GDQLTSTRKYTVSD---GSLTVQAITREDRGAYSCRAHSDQGEAL-HTTRLLVQGPPYIVTPPEN 237

  Fly   262 VGIPIGFNITLECFIEANPTSLNY-WTRENDQMITESSKYKTETIPGHPSYKATMR------LTI 319
            :.:.|..|....|..||.|.:|.| |..|.|.:.     :|.:       .|..:|      |.|
Zfish   238 ITVNISQNAQFTCQAEAYPGNLTYTWYWEEDNVY-----FKND-------LKLRVRIFIDGTLII 290

  Fly   320 TNVQSSDYGNYKCVAKNPRGDMDGNIKLYM---------SSPPTTQPP--------------PTT 361
            ..|:..|.|.|.|...|..| :..:...|:         :.||....|              |..
Zfish   291 YRVKPEDAGKYTCSPSNSLG-ISPSASAYLTVQYPARVVNMPPVIYVPRKLSGIIRCPVDANPPV 354

  Fly   362 TTLR-----------------RTTTTAAEIA------LDGYINTPLNGNGIGIVGEGPTNSVI-- 401
            |::|                 :.|..:..:|      |..|...|.  |.:|.:|:.|..:::  
Zfish   355 TSVRWEKDGYPLRIEKYPGWSQMTDGSIRVAEVTEDSLGTYTCVPY--NVLGTMGQSPPATLVLK 417

  Fly   402 --------------------------ASGKSSIKYLSNLNEIDKSKQKLTGSSPKGFDWSK-GKS 439
                                      |||...|..:                     .|.| ||.
Zfish   418 DPPYFNVRPGGEYRQEAGRELVIPCAASGDPEIPTI---------------------QWRKVGKP 461

  Fly   440 SGSHGNLMAS 449
            |.|..||:.|
Zfish   462 SRSKHNLLPS 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 27/111 (24%)
Ig 69..139 CDD:143165 21/79 (27%)
IG_like 165..249 CDD:214653 24/83 (29%)
IGc2 172..237 CDD:197706 23/64 (36%)
IG_like 267..348 CDD:214653 22/87 (25%)
Ig 270..339 CDD:299845 20/75 (27%)
igsf9baXP_009289969.2 IG 30..115 CDD:214652 26/96 (27%)
I-set 139..225 CDD:254352 26/91 (29%)
I-set 229..321 CDD:333254 26/104 (25%)
Ig 345..415 CDD:325142 12/71 (17%)
Ig 438..503 CDD:319273 13/55 (24%)
FN3 511..606 CDD:238020
FN3 622..706 CDD:238020
Atrophin-1 <924..1361 CDD:331285
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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