DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and igsf9b

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_686205.6 Gene:igsf9b / 553348 ZFINID:ZDB-GENE-060810-28 Length:2021 Species:Danio rerio


Alignment Length:455 Identity:97/455 - (21%)
Similarity:164/455 - (36%) Gaps:137/455 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VALSTDTGSEGNAGNVG-----------GSTLNNVISEDPEFTDVIENITVPAGRNVKLACSVKN 77
            :.|||:...:|..|...           |:|..|:..     ..|:|  .|..|.||.:   :..
Zfish    22 LTLSTEPVVQGRVGGFAELGCSLTPPSEGATTPNLFP-----LHVVE--WVRLGYNVPI---LIK 76

  Fly    78 LGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDKHRTWFLHINNVQEEDRGRYMCQI--- 139
            .|||..           .||.:.   ..|:|::       |...|.:..:..||.|.:.|:|   
Zfish    77 FGSYTP-----------RVHPNY---KGRVSLS-------RGASLMVEKLTLEDEGWFECRILLL 120

  Fly   140 NTVTAKTQYG---FVKVVVPPNIDDALTSSDIIVRE---------GDNVTLRCKAKGSPEPTIKW 192
            :..:.:.|.|   |:.:..||          :.::.         |:::||.|.|.|:|:|||.|
Zfish   121 DRTSDEFQNGTWNFLSITAPP----------VFIKTPPPFLEVLLGESLTLHCDAHGNPKPTIIW 175

  Fly   193 KR-----DDGNKI-VINKTLEVHDLETDSLELERISRLHMGAYLCIASNGVPPSVSKRIKVSVDF 251
            ::     :...:| |:|:|          |.|.:::|...|.|.|..||. ..:::...::.|..
Zfish   176 RKYLSAAEKQEEIQVLNET----------LSLSKVTRETAGIYKCHVSNS-EGNLTHSTQLQVKG 229

  Fly   252 SPMVWIPHQLVGIPIGFNITLECFIEANPTSLNY-WTRENDQMITESSKYKTETIPGHPSYKATM 315
            .|::.|..:...:.:..:..|:|..||.|::|.| |.::...:      |..|.:..........
Zfish   230 PPIIIIAPEDTTMNMSQDAVLQCQAEAYPSNLTYEWWKQGQNV------YHIEILKSRVKILVDG 288

  Fly   316 RLTITNVQSSDYGNYKC-----------------------VAKNPRG-----DMDGNIKLYMSSP 352
            .|.|:.:...|.|||.|                       |.:.||.     .|.|.|    ..|
Zfish   289 TLLISALIPDDSGNYTCRPTNGLMTPPAASAYLTVKHPARVVRMPRETYLPMGMGGKI----PCP 349

  Fly   353 PTTQPPPTTTTLRRTTTTAAEIALDGY----IN-------TPLNGNGIGIVGEGPTNSVIASGKS 406
            ...:||....   ..|...|.:.|:.|    :|       |..|.:.:|:......||....|:|
Zfish   350 VQAEPPMLYV---NWTKDGASLNLEQYPGWMVNSEGSVFITAANDDAVGMYTCTAYNSYGTMGQS 411

  Fly   407  406
            Zfish   412  411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 22/101 (22%)
Ig 69..139 CDD:143165 14/69 (20%)
IG_like 165..249 CDD:214653 23/98 (23%)
IGc2 172..237 CDD:197706 23/79 (29%)
IG_like 267..348 CDD:214653 23/109 (21%)
Ig 270..339 CDD:299845 19/92 (21%)
igsf9bXP_686205.6 Ig 27..132 CDD:299845 27/135 (20%)
IG_like 148..227 CDD:214653 23/89 (26%)
IGc2 156..217 CDD:197706 23/71 (32%)
Ig 237..323 CDD:299845 17/91 (19%)
IG_like 237..323 CDD:214653 17/91 (19%)
Ig 345..411 CDD:143165 15/72 (21%)
IG_like 435..507 CDD:214653
IGc2 437..496 CDD:197706
FN3 512..603 CDD:238020
FN3 621..709 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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