DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-epsilon and Pvr

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_081790.1 Gene:Pvr / 52118 MGIID:107741 Length:408 Species:Mus musculus


Alignment Length:363 Identity:75/363 - (20%)
Similarity:118/363 - (32%) Gaps:124/363 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NITVPAGRNVKLACSV---KNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDK-----HDK 116
            |.|...|.:..|.||:   :|:...::.||..:...     :|.:     ::|.|.|     .:.
Mouse    37 NSTGVLGGSTTLHCSLTSNENVTITQITWMKKDSGG-----SHAL-----VAVFHPKKGPNIKEP 91

  Fly   117 HRTWF-----------LHINNVQEEDRGRYMCQINTVT--AKTQYGFVKVVV-PPNIDDALTSSD 167
            .|..|           |.|:|:..||.|.|.|||.|..  :::...::||.. |.|..:||..|.
Mouse    92 ERVKFLAAQQDLRNASLAISNLSVEDEGIYECQIATFPRGSRSTNAWLKVQ
ARPKNTAEALEPSP 156

  Fly   168 IIVREGDNVTLRCKAKGSPEPTIKW--------------------------------KRDDGNKI 200
            .::.:  :|.....|.|.|...|.|                                ::.||..|
Mouse   157 TLILQ--DVAKCISANGHPPGRISWPSNVNGSHREMKEPGSQPGTTTVTSYLSMVPSRQADGKNI 219

  Fly   201 VINKTLEVHDLETDSLELERISRLHMGAYLCIASNGVPPSVSKRIKVSVDFSPMVWIPHQLVGIP 265
            ..  |:|...|:    ||:::        |...|...||.     .||:......|    .||:.
Mouse   220 TC--TVEHESLQ----ELDQL--------LVTLSQPYPPE-----NVSISGYDGNW----YVGLT 261

  Fly   266 IGFNITLECFIEANP----TSLNYWTRENDQMITESSKYKTETIPGHPSYKATMRL--------- 317
               |:||.|...:.|    ...|:.|...|             .|.....:..|.|         
Mouse   262 ---NLTLTCEAHSKPAPDMAGYNWSTNTGD-------------FPNSVKRQGNMLLISTVEDGLN 310

  Fly   318 ------TITNVQSSDYGNYKCVAKNPRGDMDGNIKLYM 349
                  .:||...|..|....:.|....:|..|.:|::
Mouse   311 NTVIVCEVTNALGSGQGQVHIIVKEKPENMQQNTRLHL 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 28/115 (24%)
Ig 69..139 CDD:143165 20/88 (23%)
IG_like 165..249 CDD:214653 20/115 (17%)
IGc2 172..237 CDD:197706 16/96 (17%)
IG_like 267..348 CDD:214653 18/99 (18%)
Ig 270..339 CDD:299845 15/87 (17%)
PvrNP_081790.1 IG_like 35..141 CDD:214653 26/113 (23%)
Ig1_PVR_like 44..142 CDD:143195 24/107 (22%)
Ig2_Nectin-2_like 145..240 CDD:143327 20/110 (18%)
IG_like 262..333 CDD:214653 15/83 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.