DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and negr1

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_009300786.1 Gene:negr1 / 445374 ZFINID:ZDB-GENE-040822-27 Length:360 Species:Danio rerio


Alignment Length:340 Identity:100/340 - (29%)
Similarity:151/340 - (44%) Gaps:50/340 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 EFTDVIENITVPAGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDKH 117
            ::|...|::....|....|.|.:.: |..|.||::  :|:|:...|...:.:||:|:..:..|||
Zfish    39 DYTTSSESVVSRQGDTALLRCYLLD-GISKGAWLN--RSSIIYAGNDKWSGDPRVSIVSNVGDKH 100

  Fly   118 RTWFLHINNVQEEDRGRYMCQINT---VTAKTQYGFVKVVVPPNIDDALTSSDIIVREGDNVTLR 179
            . :.|.|..|...|.|.|.|.|.:   :..|.....||  |||.|.|  .||||.|.||.||:|.
Zfish   101 E-YSLQIQKVDVTDEGVYTCSIQSERNLHPKLIQLIVK--VPPKIYD--ISSDITVNEGSNVSLI 160

  Fly   180 CKAKGSPEPTIKWKRDDGNKIVINKTLEVHDLETDSLELERISRLHMGAYLCIASNGVPPSVSKR 244
            |.|.|.|||.|.|:.       |:.:...:: ..:.|.:..|||...|.|.|.|.|.:....:|.
Zfish   161 CAASGKPEPKISWRH-------ISPSARKYE-SGEYLNITGISRDQAGDYECGAENDIASPDTKT 217

  Fly   245 IKVSVDFSPMVWIPHQLV--GIPIGFNITLECFIEANPTSLNYWTRENDQMITESSKYKTE---- 303
            ::|:|:|.|.:   |::.  |:..|....|.|...|.|:.:..|             ||.|    
Zfish   218 VRVTVNFPPAI---HEMKSHGVRPGQVALLRCEAAAVPSPVFEW-------------YKGEKRIN 266

  Fly   304 ----TIPGHPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSPPTTQ---PPPTT 361
                .:..:.|.::.  ||:.|:....||||.|||.|..|..:.::.|.....|||.   ..|.:
Zfish   267 MGQGIVINNLSSRSV--LTVKNMTQDRYGNYTCVAVNRLGTANASVPLNPIIEPTTTSAVSSPAS 329

  Fly   362 TTLRRTTTTAAEIAL 376
            ......:|..||:.|
Zfish   330 NPAMYGSTGGAEVLL 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 28/98 (29%)
Ig 69..139 CDD:143165 22/69 (32%)
IG_like 165..249 CDD:214653 30/83 (36%)
IGc2 172..237 CDD:197706 23/64 (36%)
IG_like 267..348 CDD:214653 22/88 (25%)
Ig 270..339 CDD:299845 20/76 (26%)
negr1XP_009300786.1 Ig 42..121 CDD:299845 24/82 (29%)
IG_like 44..136 CDD:214653 26/95 (27%)
I-set 140..222 CDD:254352 33/91 (36%)
IGc2 153..208 CDD:197706 22/62 (35%)
IG_like 236..312 CDD:214653 22/90 (24%)
IGc2 238..304 CDD:197706 21/80 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576313
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - otm26286
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.750

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