DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and DIP-alpha

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001259218.1 Gene:DIP-alpha / 31322 FlyBaseID:FBgn0052791 Length:554 Species:Drosophila melanogaster


Alignment Length:438 Identity:167/438 - (38%)
Similarity:239/438 - (54%) Gaps:70/438 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 STLNNVISEDPEFTDVIENITVPAGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPR 106
            |.|..:.:..|||.:.|.|::|..||:....|.|::||.|:|.|:..:..||..:|.:|||.|||
  Fly    32 SLLEAIGAFQPEFVESISNVSVAVGRDATFTCHVRHLGGYRVGWLKADTKAIQAIHENVITHNPR 96

  Fly   107 ISVTH-DKHDKHRTWFLHINNVQEEDRGRYMCQINTVTAKTQYGFVKVVVPPNIDDALTSSDIIV 170
            ::|:| |::    ||.|||..|.|||||.||||:||...|:|.||:.||:||:.....||||:||
  Fly    97 VTVSHLDQN----TWNLHIKAVSEEDRGGYMCQLNTDPMKSQIGFLDVVIPPDFISEDTSSDVIV 157

  Fly   171 REGDNVTLRCKAKGSPEPTIKWKRDDGNKIVI-----NKTLEVHDLETDSLELERISRLHMGAYL 230
            .||.:|.|.|:|:|.|||.:.|:|:|||:||:     .||| ......:.|:|.:|||..||:||
  Fly   158 PEGSSVRLTCRARGYPEPIVTWRREDGNEIVLKDNVGTKTL-APSFRGEVLKLSKISRNEMGSYL 221

  Fly   231 CIASNGVPPSVSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANPTSLNYWTRENDQMIT 295
            |||||||||||||||.:|:.|.|::.:|:||||.|:|.::.:||.:||:|.|:|||.::..:||.
  Fly   222 CIASNGVPPSVSKRISLSIHFHPVIQVPNQLVGAPLGTDVQIECHVEASPKSINYWIKDTGEMIV 286

  Fly   296 ESSKYKTETIPGHPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSPPTTQPPPT 360
            .|.||..:. .....|:..|.:.:...|..|.|:|:|:|||..|::|.:|:||....|...    
  Fly   287 TSGKYHVQE-SSQSMYETKMSMIVRKFQKDDVGSYRCIAKNSLGEVDSSIRLYEIPGPNRN---- 346

  Fly   361 TTTLRRTTTTAAEIALDGYINTPLNGNGIGIVGEGPTNSVIASGKSSIKYLSNLNEIDKSKQ--- 422
                                ..||||.|   .|.|...|:.|          :.|:|.|.||   
  Fly   347 --------------------KNPLNGGG---KGGGAGGSLDA----------DANDILKQKQQVK 378

  Fly   423 --------KLTGSSPKGFDWSKGKSSG----------SHGNLMASSWP 452
                    :|...|.:.|:...|:..|          :.||..|:..|
  Fly   379 VTYQPEDEELQYGSVEDFEAEGGEGGGLTPLSPHVYYTSGNKPATHKP 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 45/96 (47%)
Ig 69..139 CDD:143165 33/70 (47%)
IG_like 165..249 CDD:214653 49/88 (56%)
IGc2 172..237 CDD:197706 34/69 (49%)
IG_like 267..348 CDD:214653 28/80 (35%)
Ig 270..339 CDD:299845 24/68 (35%)
DIP-alphaNP_001259218.1 IG_like 49..129 CDD:214653 39/83 (47%)
Ig 51..131 CDD:299845 39/83 (47%)
I-set 144..240 CDD:254352 51/96 (53%)
IGc2 159..228 CDD:197706 34/69 (49%)
Ig 244..337 CDD:299845 35/93 (38%)
I-set 244..337 CDD:254352 35/93 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I10955
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 128 1.000 Inparanoid score I4644
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26286
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12231
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3058
SonicParanoid 1 1.000 - - X97
99.000

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