DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and Vsig10

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001258265.1 Gene:Vsig10 / 304529 RGDID:1565800 Length:564 Species:Rattus norvegicus


Alignment Length:449 Identity:98/449 - (21%)
Similarity:163/449 - (36%) Gaps:122/449 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ISEDPEFTDVIENITV-PAGRNVKLACSVKNLGSYKVAWMH--FEQSAILTVHNHVITRNPRISV 109
            |..|..||| .|.:.: ....||.|.|...:.....|.|..  .|.:.:::.::.:....||.|:
  Rat    45 IHPDLPFTD-SEAVAIGEVHENVTLRCGSLSGSRGLVTWYRNDSEPAFLVSSNSSLPPAAPRFSL 108

  Fly   110 THDKHDKHRTWFLHINNVQEEDRGRYMCQINTVTAKTQYGFVKVVV---PPNID------DALTS 165
                   .....|.|..::.||.|.|.|:  .|..:|.:..|::.|   |.:||      ..|.:
  Rat   109 -------EDAGALRIEALRLEDDGNYTCR--EVLNETHWFPVQLRVTSGPAHIDVNISATGTLPN 164

  Fly   166 SDIIVREGDNVTLRCKAKGSPEPTIKWKRDDGNKIVINKTLEVH---------DLETDSLELERI 221
            ..:....|..|...|.:...|.|.::|            .::.|         :|..:|..|..:
  Rat   165 GTLYAARGSQVDFSCCSAAQPPPEVEW------------WIQTHSSVSESLGKNLSANSFTLMLM 217

  Fly   222 SRLHMGAYLCIASNGVPPSVSKR-IKVSVD---FSPMVWIPHQLVGI-PIGFNITLECFIEA--- 278
            |:...|.|.|.|:|    .:|:| .||:.:   :.|....|....|: |...|:.|.|..:.   
  Rat   218 SKNLQGNYTCSATN----VLSRRQRKVTTELLVYWPPPSAPQCSAGLSPESANLELTCNWDGGYP 278

  Fly   279 NPTSLNYWTRENDQMITESSKYKTETIPGHPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDG 343
            :||.|  ||.|...::..:||.:|.:    ||            |.|:...:|||..:..|...|
  Rat   279 DPTFL--WTEEPGGVVVGNSKLQTLS----PS------------QLSEGKKFKCVGSHILGPESG 325

  Fly   344 -NIKLYMSSPPTTQPPPTTTTLRRTTTTAAEIALDGYINTPLNGNGIGIVGEGPTNSVIASGKSS 407
             :..:.:|||.....|..|..:....|...::                   ||      |:..:.
  Rat   326 ASCVVQISSPLLASRPMKTCLVGGDVTLTCQV-------------------EG------ANPPAR 365

  Fly   408 IKYLSNLNEIDKSKQKLTGSSPKGFDWSKGKSSGSHGNLMASSWPLICCILALLTTHSC 466
            |::|.||.:.:.:.|    .|.:.....:|:||.                   ||.|:|
  Rat   366 IQWLRNLTQPETAIQ----PSSRYVITQQGQSSS-------------------LTIHNC 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 21/98 (21%)
Ig 69..139 CDD:143165 16/71 (23%)
IG_like 165..249 CDD:214653 20/93 (22%)
IGc2 172..237 CDD:197706 16/73 (22%)
IG_like 267..348 CDD:214653 21/84 (25%)
Ig 270..339 CDD:299845 18/71 (25%)
Vsig10NP_001258265.1 Ig 60..146 CDD:299845 20/94 (21%)
IG_like 60..145 CDD:214653 20/93 (22%)
IG_like 165..246 CDD:214653 20/96 (21%)
Ig 175..241 CDD:143165 18/81 (22%)
Ig_3 255..318 CDD:290638 21/80 (26%)
IG_like 347..429 CDD:214653 17/103 (17%)
Ig 351..426 CDD:143165 17/99 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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