DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and Lsamp

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_030104997.1 Gene:Lsamp / 268890 MGIID:1261760 Length:392 Species:Mus musculus


Alignment Length:308 Identity:98/308 - (31%)
Similarity:147/308 - (47%) Gaps:26/308 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 EFTDVIENITVPAGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDKH 117
            :|....:||||..|....|.|.|::..| ||||::  :|.|:...:...:.:||:.:    ..:|
Mouse    64 DFNRGTDNITVRQGDTAILRCVVEDKNS-KVAWLN--RSGIIFAGHDKWSLDPRVEL----EKRH 121

  Fly   118 R-TWFLHINNVQEEDRGRYMCQINTV-TAKTQYGFVKVVVPPNIDDALTSSDIIVREGDNVTLRC 180
            . .:.|.|..|...|.|.|.|.:.|. ..||...::.|.|||.|.:  .|||:.|.||.||||.|
Mouse   122 ALEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISN--ISSDVTVNEGSNVTLVC 184

  Fly   181 KAKGSPEPTIKWKRDDGNKIVINKTLEVHDLETDSLELERISRLHMGAYLCIASNGVPPSVSKRI 245
            .|.|.|||.|.|:    :...:.:..|.   |.:.||:..|:|...|.|.|.|:|.|..:..|::
Mouse   185 MANGRPEPVITWR----HLTPLGREFEG---EEEYLEILGITREQSGKYECKAANEVSSADVKQV 242

  Fly   246 KVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANPTSLNYWTRENDQMITESSKYKTETIPGHPS 310
            ||:|::.|.: ...:......|...:|:|...|.|.....|.|: |..|..::..:.::..|..|
Mouse   243 KVTVNYPPTI-TESKSNEATTGRQASLKCEASAVPAPDFEWYRD-DTRINSANGLEIKSTEGQSS 305

  Fly   311 YKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSPPTTQPP 358
                  ||:|||....||||.|||.|..|..:.::.|:....||...|
Mouse   306 ------LTVTNVTEEHYGNYTCVAANKLGVTNASLVLFKRVLPTVPHP 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 29/97 (30%)
Ig 69..139 CDD:143165 20/70 (29%)
IG_like 165..249 CDD:214653 33/83 (40%)
IGc2 172..237 CDD:197706 25/64 (39%)
IG_like 267..348 CDD:214653 25/80 (31%)
Ig 270..339 CDD:299845 23/68 (34%)
LsampXP_030104997.1 Ig 69..159 CDD:386229 28/96 (29%)
Ig_3 163..232 CDD:372822 30/77 (39%)
Ig_3 250..325 CDD:372822 24/82 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833576
Domainoid 1 1.000 45 1.000 Domainoid score I12107
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 142 1.000 Inparanoid score I4449
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - mtm8732
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3058
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.930

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