DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and Vcam1

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_037021.1 Gene:Vcam1 / 25361 RGDID:3952 Length:739 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653
Ig 69..139 CDD:143165
IG_like 165..249 CDD:214653
IGc2 172..237 CDD:197706
IG_like 267..348 CDD:214653
Ig 270..339 CDD:299845
Vcam1NP_037021.1 Ig 32..98 CDD:299845
IG_like 35..110 CDD:214653
Ig2_VCAM-1 116..214 CDD:143313
IG_like 232..308 CDD:214653
IGc2 238..298 CDD:197706
IG_like 321..400 CDD:214653
IGc2 328..386 CDD:197706
Ig2_VCAM-1 404..502 CDD:143313
Ig_2 514..596 CDD:290606
IG_like 519..596 CDD:214653
Ig_3 604..672 CDD:290638
IG_like 609..685 CDD:214653
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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