DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and Pvr

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_058772.2 Gene:Pvr / 25066 RGDID:3813 Length:412 Species:Rattus norvegicus


Alignment Length:349 Identity:77/349 - (22%)
Similarity:120/349 - (34%) Gaps:81/349 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VIENITVPAGRNVKLACSV---KNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDK----- 113
            |:.|.|...|.:..|.||:   .|:...::.||..:...          .:|.::|.|.|     
  Rat    39 VLSNSTGFLGGSTVLHCSLASKDNVTITQLTWMKRDPDG----------SHPSVAVFHPKKGPSI 93

  Fly   114 HDKHRTWF-------------LHINNVQEEDRGRYMCQINT--VTAKTQYGFVKVVV-PPNIDDA 162
            .|..|..|             |.|:|::.||.|.|.|||.|  ..:|:...::||.. |.|..:|
  Rat    94 SDPERVKFLVAKVYEDLRNASLAISNLRVEDEGIYECQIATFPTGSKSANVWLKVFARPKNTAEA 158

  Fly   163 LTSSDIIVREGDNVTLRCKAKGSPEPTIKWKRD--------------DGNKIVINKTLEVHDLET 213
            |..|..::.:  :|.....|.|.|...|.|..:              .|...||:....|...:.
  Rat   159 LEPSPTLMPQ--DVAKCISADGHPPGRITWSSNVNGSYREMKETGSQPGTTTVISYLSMVPSSQA 221

  Fly   214 DSLEL----ERISRLHMGAYLCIASNGVPPSVSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLEC 274
            |...:    |..|.........|.|...||      :||:......|    .:|:.   |:.|.|
  Rat   222 DGTNITCTVEHESFQEPDQQPLILSLPYPP------EVSISGYEGNW----YIGLT---NVNLTC 273

  Fly   275 FIEANPTSLNY-WTRENDQMITESSKYKTETIPGHPSYKAT-MRLTITNVQSSDYGNYKCVAKNP 337
            ...:.|...|| |:.            .|..:|....::.. ..|.|:.|...:...:.|.|.|.
  Rat   274 EARSKPPPTNYSWST------------ATGPLPNSTHFQENGSHLLISTVDDLNNTIFVCKAINA 326

  Fly   338 RGDMDGNIKLYMSSPPTTQPPPTT 361
            .|...|.:.:.:.......||.|:
  Rat   327 LGSGQGQVTILVKEASEILPPKTS 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 30/118 (25%)
Ig 69..139 CDD:143165 21/90 (23%)
IG_like 165..249 CDD:214653 19/101 (19%)
IGc2 172..237 CDD:197706 15/82 (18%)
IG_like 267..348 CDD:214653 17/82 (21%)
Ig 270..339 CDD:299845 14/70 (20%)
PvrNP_058772.2 IG_like 41..148 CDD:214653 28/116 (24%)
Ig1_PVR_like 49..148 CDD:143195 25/108 (23%)
Ig 152..246 CDD:299845 19/95 (20%)
IG_like 268..338 CDD:214653 17/81 (21%)
Ig <269..342 CDD:299845 16/84 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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