DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and Lrit3

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:423 Identity:86/423 - (20%)
Similarity:134/423 - (31%) Gaps:186/423 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 LTSSDIIVREGDNVTLRCKAKGSPEPTIKWKRDDG---NKIVINKTLEVHDLETDSLELERISRL 224
            ::::.|....|.||.|||.|||.|.|.:.|.|.||   |..||.:: ....:....:.|..||..
Mouse   258 MSATKITSALGSNVLLRCDAKGHPTPQLTWTRSDGSTVNYTVIQES-PGEGIRWSIISLTSISHK 321

  Fly   225 HMGAYLCIASN--GVPPSVSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANPTSLNYWT 287
            ..|.|.|.|.|  |:..:|   :.|:|            ||   |...||      :|.|     
Mouse   322 DAGDYRCKAKNLAGISEAV---VTVTV------------VG---GVTTTL------SPDS----- 357

  Fly   288 RENDQMITESSKYKTETIPGHPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDG--------- 343
                          :|..||.|.                       .::|:..:.|         
Mouse   358 --------------SERSPGEPP-----------------------EQHPQPGLGGSTPPSKSWL 385

  Fly   344 -------------NIKLYMS--SPPTTQPPP------TTTTLR-----RTTTTAAEIAL---DGY 379
                         :..||.|  |||.:..||      .||:::     ||..|:.:..|   .|.
Mouse   386 SPGLTSAPSYPTPSAALYTSTWSPPPSSLPPIFSAASATTSVQTSISGRTARTSHQPPLLHPGGK 450

  Fly   380 INTPLNGNG-------------IGIVGEGPT------------------------NSVIASGKSS 407
            .|..:..||             :.::.:...                        ||..::.:||
Mouse   451 SNAKIEKNGRKFPPLSASKKEELALLDQAAPMETNVTIKDLRVARETGVSVTLMWNSSSSTQESS 515

  Fly   408 I-----KY------LSNLNEIDKSKQKLTGSS----------PKG----------FDWSKGKSSG 441
            :     ||      |.|.::..|::..:.|..          |||          |..::.:..|
Mouse   516 VTVLYSKYGEKDLLLVNADDYGKNQATINGLEPGSQYVACVCPKGVGPREDLCITFSTNRVEGRG 580

  Fly   442 SHGNLM--ASSW------PLICCILALLTTHSC 466
            |..:|:  .:|.      ||||.:|..:....|
Mouse   581 SQWSLLLVVTSTACVIVVPLICFLLYKVCKLQC 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653
Ig 69..139 CDD:143165
IG_like 165..249 CDD:214653 30/88 (34%)
IGc2 172..237 CDD:197706 26/69 (38%)
IG_like 267..348 CDD:214653 11/102 (11%)
Ig 270..339 CDD:299845 9/68 (13%)
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79
LRR_8 61..117 CDD:290566
LRR 2. /evidence=ECO:0000255 80..103
leucine-rich repeat 83..106 CDD:275378
LRR 3. /evidence=ECO:0000255 104..128
LRR_8 105..165 CDD:290566
LRR_4 106..146 CDD:289563
leucine-rich repeat 107..130 CDD:275378
LRR_4 129..170 CDD:289563
LRR 4. /evidence=ECO:0000255 129..151
leucine-rich repeat 131..154 CDD:275378
LRR 5. /evidence=ECO:0000255 152..175
leucine-rich repeat 155..168 CDD:275378
Ig 254..335 CDD:299845 27/77 (35%)
IG_like 263..339 CDD:214653 28/76 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..391 10/88 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..464 9/38 (24%)
FN3 489..563 CDD:238020 13/73 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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