DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and Lrit1

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_666357.2 Gene:Lrit1 / 239037 MGIID:2385320 Length:624 Species:Mus musculus


Alignment Length:419 Identity:89/419 - (21%)
Similarity:137/419 - (32%) Gaps:133/419 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 NNVISEDPEFTDVIENITVPAGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHV-----ITRN 104
            |.:.:..||....:||:|.....|.:|....:.|..   .|.|.:....|:.| |.     :..|
Mouse   141 NRLSTLPPEAAHFLENLTFLDLSNNQLMRLPEELLD---VWAHLKTGPFLSGH-HARLILGLQDN 201

  Fly   105 PRISVTHDKHDKHRTWFLHI-------NNVQEEDRGRYMCQINTVTAKTQYGFVKV--VVPPNID 160
            |.:.      |......:|:       |.:..|.|.|  |......|...:..:::  ...|.:.
Mouse   202 PWVC------DCRLYDLVHLLDGWVSSNLIFIEARLR--CASPRSLAGVAFSQLELRKCQSPELR 258

  Fly   161 DALTSSDIIVREGDNVTLRCKAKGSPEPTIKWKRDDGNKIVINKTLEVH-DLETDS-----LELE 219
            ..:||  ||...|..|.|||.|.|.|.|.:.|:|.:|..  :|.|  || ::.:|.     |:|.
Mouse   259 PGVTS--IISPLGSTVLLRCGATGIPGPEMSWRRANGRP--LNGT--VHQEVSSDGSSWTLLDLP 317

  Fly   220 RISRLHMGAYLCIASNGVPPSVSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANP-TSL 283
            .:|....|.|:|.|.|.                             :|.:.||...|...| ||.
Mouse   318 VVSLFDSGDYICQAKNF-----------------------------LGASETLISLIVTEPQTST 353

  Fly   284 NY-------WTRE---------NDQMITESSKYKTE-----TIPGHPSYKATMRLTITNVQSSDY 327
            .|       |.|.         |::::.....:..|     |.|..||.|.  .|.:.|.|....
Mouse   354 GYSGIPGVLWARTGEGAEAAAYNNKLVARHVPHMPEHVALATKPSMPSIKE--ELALQNFQMDVP 416

  Fly   328 GNYKCVAKNPR--------------GDMDGNIKLYMSSPP----------------------TTQ 356
            |.:   ::.|.              ||...::.|...:|.                      |.:
Mouse   417 GEF---SREPSEHQEAQMVRSLKVVGDTYHSVSLVWKAPQAGNTTAFSVLYAVFGHRDMRRMTVE 478

  Fly   357 PPPTTTT---LRRTTTTAAEIALDGYINT 382
            |..|:.|   |...|...|.:.:.|.:.|
Mouse   479 PGKTSVTIEGLAPKTKYVACVCVRGLVPT 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 21/109 (19%)
Ig 69..139 CDD:143165 16/81 (20%)
IG_like 165..249 CDD:214653 28/89 (31%)
IGc2 172..237 CDD:197706 25/70 (36%)
IG_like 267..348 CDD:214653 24/116 (21%)
Ig 270..339 CDD:299845 21/104 (20%)
Lrit1NP_666357.2 LRRNT 23..61 CDD:214470
LRR 1 60..81
LRR_8 63..143 CDD:290566 1/1 (100%)
leucine-rich repeat 64..84 CDD:275378
LRR 2 84..105
leucine-rich repeat 85..132 CDD:275378
LRR 3 108..129
LRR_8 131..>176 CDD:290566 9/34 (26%)
LRR_4 131..172 CDD:289563 8/30 (27%)
LRR 4 132..153 3/11 (27%)
leucine-rich repeat 133..156 CDD:275378 3/14 (21%)
LRR 5 156..177 5/23 (22%)
leucine-rich repeat 157..180 CDD:275378 5/25 (20%)
leucine-rich repeat 181..205 CDD:275378 5/24 (21%)
TPKR_C2 201..>241 CDD:301599 9/47 (19%)
Ig 258..346 CDD:299845 32/122 (26%)
IG_like 268..346 CDD:214653 28/110 (25%)
FN3 432..502 CDD:214495 11/69 (16%)
LRR 6 526..549
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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