DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and rig-5

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001251131.1 Gene:rig-5 / 172791 WormBaseID:WBGene00004372 Length:482 Species:Caenorhabditis elegans


Alignment Length:335 Identity:111/335 - (33%)
Similarity:158/335 - (47%) Gaps:42/335 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GRNVKLACSVKNLGSYKVAWMHFEQ-SAILTVHNHVITR------NPRISVTHDKHDKHRTWFLH 123
            |::|...|.|.:|||:.||::..:. ..:|:....|..|      .|||.      |.|..|.|.
 Worm    99 GQDVDFTCIVNDLGSHMVAFVKADSPPRLLSFDEKVFRRRNKYELKPRIG------DLHNEWVLT 157

  Fly   124 INNVQEEDRGRYMCQINTVTAKTQYGFVKVVVPPNIDDALTSSDIIVREGDNVTLRCKAKGSPEP 188
            |.||||.|||.|.|||||.......|.:.|.|||.:..: |.:.:.||||:||:|.|||.|:|.|
 Worm   158 IKNVQESDRGNYSCQINTEPITLSTGELDVKV
PPVVSRS-TPAAVEVREGNNVSLTCKADGNPTP 221

  Fly   189 TIKWKRDDGNKIVINKT--LEVHDLETDSLELERISRLHMGAYLCIASNGVPPSVSKRIKVSVDF 251
            |:.|:|.|...|..|..  ..........|.|.::||.||..|||:||||:||..|..:|:.|.|
 Worm   222 TVIWRRQDRQIIRYNGATGFGASVFHGPVLHLTKVSRKHMSEYLCVASNGIPPDESWTVKLLVTF 286

  Fly   252 SPMVWIPHQLVGIPIGFNITLECFIEANPTSLNYWTRENDQMITESSKYKTETIPGHPSYKATMR 316
            .|:|....:.|...:|....:.|..||.|.....|.::.:.:...::...|.|:.|  .|.:...
 Worm   287 PPLVQAQSETVQASVGSMARMVCTTEAWPRPEMGWEKDGEPVYESNNVAMTHTVSG--QYHSVHI 349

  Fly   317 LTITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSPPTTQPPPTTTTLRRTTTTAAEIALDGYIN 381
            |.|.|||||.:|.|:|||||..|                        :..:..|..:|:.:.:.|
 Worm   350 LEIRNVQSSHFGVYRCVAKNDNG------------------------IHHSQVTLNQISHNHFTN 390

  Fly   382 TPLNGNGIGI 391
            :.|...|.|:
 Worm   391 SNLIPEGSGM 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 35/95 (37%)
Ig 69..139 CDD:143165 28/76 (37%)
IG_like 165..249 CDD:214653 36/85 (42%)
IGc2 172..237 CDD:197706 29/66 (44%)
IG_like 267..348 CDD:214653 25/80 (31%)
Ig 270..339 CDD:299845 23/68 (34%)
rig-5NP_001251131.1 IG_like 92..189 CDD:214653 35/95 (37%)
Ig_3 191..270 CDD:372822 31/79 (39%)
IG 294..380 CDD:214652 26/111 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I5731
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I2513
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - otm14489
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3058
SonicParanoid 1 1.000 - - X97
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.100

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