DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and Dscaml1

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:470 Identity:102/470 - (21%)
Similarity:175/470 - (37%) Gaps:87/470 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FLYVGLGCLIASSV----ALST-------DTGSEGNAGNVGGSTLNNVISEDPEFTDVIENITVP 64
            |.....|.|..|.|    ||||       ....|....|....::.:.....|...|...:..|.
Mouse   174 FFITSHGGLYISDVQKEDALSTYRCITQHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVW 238

  Fly    65 AGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDKHRTWFLHINNVQE 129
            .|.:|:|.|:........:.|:                ::.| .:..|.....|...|.|::::.
Mouse   239 TGHSVELPCAASGYPIPAIRWL----------------KDGR-PLPADSRWAKRITGLTISDLRT 286

  Fly   130 EDRGRYMCQI-NTVTAKTQYGFVKVVVPPNIDDALTSSDIIVREGDNVTLRCKAKGSPEPTIKWK 193
            ||.|.|:|:: ||..:....|.:.|:.|.::  .||...:....|..|.|.|...||||.||:|.
Mouse   287 EDSGTYICEVTNTFGSAEANGILTVIDPLHV--TLTPKKLKTGIGSTVILSCALTGSPEFTIRWY 349

  Fly   194 RDDGNKIVI-NKTLEVHDLETDSLELERISRLHMGAYLCIASNGVPPSVSKRIKVSVDFSPMVWI 257
            |:  .::|: .:.:.:..|..::|.:....:.|.|||.|.|:.....:....|.|..|.:|.:..
Mouse   350 RN--TELVLPGEAISIRGLSNETLLISSAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVS 412

  Fly   258 PHQLVGIPIGFNITLECFIEANPTSLNYWTRENDQMITESSKYKTETIPGHPSYKATM------- 315
            ......:..|...:|.|..:..|.....|..:::.::.:.|         |.:.:.||       
Mouse   413 SFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPVVRDGS---------HRTNQYTMSDGTTIS 468

  Fly   316 RLTITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSPPTTQPPPTTTTLRRTTTTAAEIALDGYI 380
            .:.:|..|..|.|.|:|.|:|..|..:...::.:..||:.:      .:|..|..|..       
Mouse   469 HMNVTGPQIRDGGVYRCTARNSVGSAEYQARINVRGPPSIR------AMRNITAVAGR------- 520

  Fly   381 NTPLNGNGIGIVGEGPTNSVIASGKSSIKYLSNLNEI--DKSKQKLTGSSPKGFDWSKGKSSGSH 443
            :|.:|...||.    |..| |...|.::....|..::  :....|||       |..||...|.:
Mouse   521 DTLINCRVIGY----PYYS-IKWYKDALLLPDNHRQVVFENGTLKLT-------DVQKGMDEGEY 573

  Fly   444 GNLMASSWPLICCIL 458
                      :|.:|
Mouse   574 ----------LCSVL 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 20/96 (21%)
Ig 69..139 CDD:143165 14/69 (20%)
IG_like 165..249 CDD:214653 23/84 (27%)
IGc2 172..237 CDD:197706 21/65 (32%)
IG_like 267..348 CDD:214653 18/87 (21%)
Ig 270..339 CDD:299845 16/75 (21%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706
Ig 125..218 CDD:353325 11/43 (26%)
I-set 226..311 CDD:336764 21/101 (21%)
Ig_3 317..389 CDD:339005 22/75 (29%)
Ig 408..498 CDD:353325 19/98 (19%)
IGc2 519..577 CDD:197706 17/86 (20%)
Ig 615..681 CDD:319273
Ig_DSCAM 707..785 CDD:143211
Ig 803..891 CDD:353325
FN3 887..981 CDD:238020
FN3 988..1085 CDD:238020
FN3 1093..1186 CDD:238020
FN3 1191..1282 CDD:238020
Ig 1307..1377 CDD:319273
FN3 1384..1474 CDD:238020
FN3 1488..1560 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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