DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and pigrl3.5

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001293027.1 Gene:pigrl3.5 / 105665598 ZFINID:ZDB-GENE-150409-6 Length:368 Species:Danio rerio


Alignment Length:197 Identity:44/197 - (22%)
Similarity:68/197 - (34%) Gaps:59/197 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 TIKWKRDDGNKIVINKTLEVHDLETDSLELERISRLHMGAYLC---IASNGVPPSVSKRIKVSVD 250
            |:||           :.|:..|               .|.|.|   |..:|: |.....:.:.|.
Zfish    84 TVKW-----------QNLQPSD---------------SGYYWCAVEIGDSGI-PDARYYLYLKVQ 121

  Fly   251 FSPMVWIPHQLVGIPIGFNITLECFIEAN-PTSLNYWTRENDQMITESSKYKTETIP-------G 307
            ..|.|.:....|....|.|::::||..:. ...|..|.|..|:...:..|..|...|       |
Zfish   122 PVPDVSVKSSSVSGHEGGNVSVQCFYSSEYHNKLKGWCRVKDKRCFKEEKTDTSQNPSVQISDDG 186

  Fly   308 HPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSPP-----TT--------QPPP 359
            ..|:...|    ..::.||.|.|.|..    ||:...::|.::.|.     ||        :.||
Zfish   187 ESSFTVLM----AELRFSDSGWYFCSV----GDLQVPVRLTVTKPEPKAAMTTGSRPKSRVEDPP 243

  Fly   360 TT 361
            ||
Zfish   244 TT 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653
Ig 69..139 CDD:143165
IG_like 165..249 CDD:214653 11/62 (18%)
IGc2 172..237 CDD:197706 9/50 (18%)
IG_like 267..348 CDD:214653 21/88 (24%)
Ig 270..339 CDD:299845 17/76 (22%)
pigrl3.5NP_001293027.1 IG_like 27..103 CDD:214653 8/44 (18%)
Ig 35..105 CDD:299845 8/46 (17%)
Ig 135..219 CDD:299845 21/91 (23%)
IG_like 137..220 CDD:214653 22/90 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 40 1.000 Domainoid score I12510
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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