DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-epsilon and si:ch211-170a17.1

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_021336930.1 Gene:si:ch211-170a17.1 / 101884914 ZFINID:ZDB-LINCRNAG-131127-306 Length:628 Species:Danio rerio


Alignment Length:88 Identity:28/88 - (31%)
Similarity:39/88 - (44%) Gaps:19/88 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 PNIDDALTSSDIIVREGDNVTLRCKAKGSPEPTIKW---------KRDDGNKIVINKTLEVHDLE 212
            |.|....|.| :.|.||.:..|.|.|:|:|.|||.|         .|:.|..:|.|         
Zfish   431 PKIRRNRTQS-VSVEEGQSAHLNCTAEGTPRPTISWVSPRKVQLNNRNHGRVMVHN--------- 485

  Fly   213 TDSLELERISRLHMGAYLCIASN 235
            ..||:::.:.....|.|:|.|||
Zfish   486 NGSLDIKAVEVQDGGVYVCTASN 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653
Ig 69..139 CDD:143165
IG_like 165..249 CDD:214653 25/80 (31%)
IGc2 172..237 CDD:197706 23/73 (32%)
IG_like 267..348 CDD:214653
Ig 270..339 CDD:299845
si:ch211-170a17.1XP_021336930.1 leucine-rich repeat 80..103 CDD:275380
PLN00113 <83..>196 CDD:331614
leucine-rich repeat 104..127 CDD:275380
leucine-rich repeat 128..151 CDD:275380
LRR_8 136..186 CDD:316378
leucine-rich repeat 152..175 CDD:275380
leucine-rich repeat 176..223 CDD:275380
LRR_8 207..255 CDD:316378
leucine-rich repeat 224..247 CDD:275380
leucine-rich repeat 248..295 CDD:275380
LRR_8 271..330 CDD:316378
leucine-rich repeat 296..319 CDD:275380
LRR_8 319..378 CDD:316378
leucine-rich repeat 320..343 CDD:275380
leucine-rich repeat 344..363 CDD:275380
PCC 348..>430 CDD:188093
I-set 431..521 CDD:254352 28/88 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I10955
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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