DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and LOC101732679

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_017945096.1 Gene:LOC101732679 / 101732679 -ID:- Length:324 Species:Xenopus tropicalis


Alignment Length:285 Identity:54/285 - (18%)
Similarity:99/285 - (34%) Gaps:108/285 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 NITVPAGRNVKLACSV---KNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDKH---- 117
            ::....|.:|.|.||:   .|..:.::.|..             ||..|.:.:..:..|.:    
 Frog    34 SVVATLGSDVLLPCSLTPEMNAENMEIRWFK-------------ITYQPYVHLYINGKDDYTAQM 85

  Fly   118 -----RT-----------WFLHINNVQEEDRGRYMCQINTVTAKTQYGFVKVVVPPNIDDALTSS 166
                 ||           :.|.|..|..:|.|.|.|.:.:    |::..|..|   .:......|
 Frog    86 PQFANRTELLKENITRGIFLLRIRKVTAQDSGNYYCFVES----TEHHGVATV---QLQVT
AVGS 143

  Fly   167 DIIVREGDNVTLRCKAKG-SPEPTIKWKRDDGNKIVINKTLEVHDLETDSLELERISRLHMGAYL 230
            .:::......|:.|::.| .|||.:.|..::|||::.:              :|::.:.....|.
 Frog   144 PLVISVITEDTVFCESDGWYPEPYLIWTDNEGNKVIPS--------------MEKVLKDEKSLYH 194

  Fly   231 CIASNGVPPSVSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANPTSLNYWTRENDQMIT 295
            .:::..:||:.|                          |||  |.:.   :|||           
 Frog   195 ILSAIYLPPTSS--------------------------NIT--CTVS---SSLN----------- 217

  Fly   296 ESSKYKTETIPGHPSYKATMRLTIT 320
            :|.:..|:||        .|||.:|
 Frog   218 QSKQSSTQTI--------EMRLPVT 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 22/117 (19%)
Ig 69..139 CDD:143165 19/92 (21%)
IG_like 165..249 CDD:214653 16/84 (19%)
IGc2 172..237 CDD:197706 12/65 (18%)
IG_like 267..348 CDD:214653 15/54 (28%)
Ig 270..339 CDD:299845 14/51 (27%)
LOC101732679XP_017945096.1 Ig 27..139 CDD:416386 23/124 (19%)
FR1 27..49 CDD:409353 4/14 (29%)
Ig strand A 28..33 CDD:409353
Ig strand A' 35..38 CDD:409353 0/2 (0%)
Ig strand B 41..49 CDD:409353 3/7 (43%)
CDR1 50..58 CDD:409353 1/7 (14%)
Ig strand C 58..63 CDD:409353 0/4 (0%)
FR2 59..63 CDD:409353 0/3 (0%)
CDR2 64..82 CDD:409353 4/30 (13%)
Ig strand C' 68..76 CDD:409353 1/7 (14%)
Ig strand C' 77..80 CDD:409353 0/2 (0%)
FR3 84..124 CDD:409353 9/39 (23%)
Ig strand D 91..96 CDD:409353 2/4 (50%)
Ig strand E 102..110 CDD:409353 2/7 (29%)
Ig strand F 117..125 CDD:409353 3/7 (43%)
CDR3 125..127 CDD:409353 0/5 (0%)
Ig strand G 127..139 CDD:409353 2/14 (14%)
FR4 128..139 CDD:409353 2/13 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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