DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and ntm

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_004916061.1 Gene:ntm / 100492453 XenbaseID:XB-GENE-6045425 Length:374 Species:Xenopus tropicalis


Alignment Length:358 Identity:112/358 - (31%)
Similarity:169/358 - (47%) Gaps:39/358 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VISEDPEFTDVIENITVPAGRNVKLACSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTH 111
            |.|.|..|...::|:||..|.:..|.|:|.|..: :|||::  :|.||...|...:.:||:.:..
 Frog    32 VRSGDAGFPKAMDNVTVRQGDSAILRCTVDNRVT-RVAWLN--RSTILYTGNDKWSIDPRVVLLA 93

  Fly   112 DKHDKHRTWFLHINNVQEEDRGRYMCQINTVT-AKTQYGFVKVVVPPNIDDALTSSDIIVREGDN 175
            :...::.   :.|.||...|.|.|.|.:.|.. .||....:.|.|||.|.|  .||.|.|.||.|
 Frog    94 NTKSQYS---IEIQNVDIYDEGPYTCSVQTDNHPKTSRVHLIVQVPPRIVD--ISSSIAVNEGSN 153

  Fly   176 VTLRCKAKGSPEPTIKWKRDDGNKIVINKTLEVHDLETDSLELERISRLHMGAYLCIASNGVPPS 240
            |:|.|.|.|.|||.:.|:       .::........|.:.||:..|:|...|.|.|.|||.|...
 Frog   154 VSLICIANGRPEPVVNWR-------YLSPKARGFVSEDEYLEITGITREQSGIYECSASNDVSAP 211

  Fly   241 VSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANPTSLNYWTRENDQMITESSKYKTETI 305
            ..:|:|::|::.|.: :..|.:|.|:|....|:|...|.|.:..:|.:|:.::.......|.|  
 Frog   212 DVRRVKLTVNYPPYI-LDAQNIGAPLGHRGILQCEASAVPAADFFWYKEDKRLSDSWRGVKVE-- 273

  Fly   306 PGHPSYKATMRLTITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSPPTTQPPPTTTTLRRTTTT 370
                :.:...|:|..||...|||||.|:|||..|..:.:|.|:.....|:.|      |.:..:|
 Frog   274 ----NRETISRVTFLNVSEQDYGNYTCMAKNLLGHSNASIILFELFQSTSSP------LLQEEST 328

  Fly   371 AAEIALDGYINTPLNGNGIGIVGEGPTNSVIAS 403
            ||        .|||.|.  |.|.:|.:.|...|
 Frog   329 AA--------LTPLKGP--GAVHDGNSGSTQCS 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 28/96 (29%)
Ig 69..139 CDD:143165 20/69 (29%)
IG_like 165..249 CDD:214653 30/83 (36%)
IGc2 172..237 CDD:197706 23/64 (36%)
IG_like 267..348 CDD:214653 24/80 (30%)
Ig 270..339 CDD:299845 21/68 (31%)
ntmXP_004916061.1 Ig 45..133 CDD:299845 27/93 (29%)
IG_like 45..133 CDD:214653 27/93 (29%)
IG_like 143..220 CDD:214653 30/83 (36%)
IGc2 150..209 CDD:197706 23/65 (35%)
ig 227..311 CDD:278476 27/89 (30%)
IG_like 230..311 CDD:214653 27/86 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 58 1.000 Domainoid score I10578
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41139
Inparanoid 1 1.050 138 1.000 Inparanoid score I4412
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - otm47726
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3058
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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