DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and mdga2

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_031747317.1 Gene:mdga2 / 100490514 XenbaseID:XB-GENE-6046933 Length:983 Species:Xenopus tropicalis


Alignment Length:504 Identity:110/504 - (21%)
Similarity:188/504 - (37%) Gaps:121/504 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 STDTG-----SEGNAGNVGGSTLNNV----------ISEDPEFTDVIENITVPAGRNVKLACSVK 76
            |.|.|     :..|.||....:.:.:          |:.||...|  :||.:  ||.||::|.|:
 Frog   329 SEDAGTYSCIANNNVGNPAKKSTSIIVRALKKGRFWITPDPYHKD--DNIQI--GREVKISCQVE 389

  Fly    77 NLGSYKVAWMHFEQSAIL-TVHNHVITR-NPRISVTHDKHDKHRTWFLHINNVQEEDRGRYMCQI 139
            .:.|.::.:..|:....| :....|||: :|.:|        ..|..|.|.:::..|.|.|.|  
 Frog   390 AVPSEELTFSWFKNGRPLRSSERMVITQTDPDVS--------PGTTNLDIIDLKFTDFGTYTC-- 444

  Fly   140 NTVTAKTQYGFVKVV----------VPPNIDDALTSSDIIVREGDNVTLRCKAKGSPEPTIKWKR 194
               .|..:.|.:..:          ||||:......|.::.||||.:.|:|:..|.|:|.|.|.|
 Frog   445 ---VASLKGGGISDISIDVNISSSTVPPNLTVPKGKSPMVAREGDTIELQCQISGKPKPIIMWSR 506

  Fly   195 DDGNKIVINKTLEVHDLETDSLELERISRLHMGAYLCIAS--NGVPPSVSKR---IKVSVDFSPM 254
            .|.:..:.:.::::...: ..|.:..:||...|.|.|..|  ||.  :|..|   :::.|.:.|.
 Frog   507 ADKDVPMPDGSMQMESYD-GILRIVNVSREMTGTYRCQTSQYNGF--NVKPRDALVQLIVQYPPA 568

  Fly   255 VWIPHQLVGIPIGFNITLEC-FIEANPTSLNYWTRENDQMITESSKYKTETIPGHPSYKATMRLT 318
            |....|.:...:|.::|:.| .:.|.||.:..:.......:.|..::.::..         ..||
 Frog   569 VEPVFQEIRQGLGHSVTMNCRVLRAYPTKVLMYEWRLGSKLLEKGQFDSQDY---------TELT 624

  Fly   319 ITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSS---PP------------------------TTQ 356
            :..:....||.|.|...|..|  .|.....::.   ||                        |..
 Frog   625 VNILAKEHYGTYNCSIINEAG--SGRCSFLVTGKAYPPEFYYDTYNPLWQNKAQIYSYKLQWTQM 687

  Fly   357 PPPTTTTLRRTTTTAAEIALDGYINTPLNGNGIGIVGEGPTNSV------------------IAS 403
            .|.....:........:..|..:....::.|||...||..||::                  ...
 Frog   688 NPDAVDRILAYRLGIRQAGLQRWWEREISVNGIIKKGELMTNNLTELVRPEPYEVRLTPINRFGE 752

  Fly   404 GKSS---IKYLSNLNE--------IDKSKQKL-TGSSPKGFDWSKGKSS 440
            |.|:   |||.:.:|.        .::|...| |......|||:|..:|
 Frog   753 GDSAIRIIKYSAPINPHLREFHCGFEESNICLFTQDDTDIFDWTKQSAS 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 25/107 (23%)
Ig 69..139 CDD:143165 19/71 (27%)
IG_like 165..249 CDD:214653 25/88 (28%)
IGc2 172..237 CDD:197706 20/66 (30%)
IG_like 267..348 CDD:214653 16/81 (20%)
Ig 270..339 CDD:299845 13/69 (19%)
mdga2XP_031747317.1 Ig 69..141 CDD:416386
Ig strand B 81..85 CDD:409353
Ig strand C 94..98 CDD:409353
Ig strand E 116..120 CDD:409353
Ig strand F 130..135 CDD:409353
IG 177..246 CDD:214652
Ig 271..342 CDD:416386 3/12 (25%)
Ig strand A 271..275 CDD:409353
Ig strand B 285..295 CDD:409353
Ig strand C 301..305 CDD:409353
Ig strand C' 307..309 CDD:409353
Ig strand D 314..319 CDD:409353
Ig strand E 320..326 CDD:409353
Ig strand F 333..341 CDD:409353 1/7 (14%)
Ig 376..451 CDD:416386 23/89 (26%)
Ig strand B 382..386 CDD:409353 2/3 (67%)
Ig strand C 397..401 CDD:409353 0/3 (0%)
Ig strand E 427..431 CDD:409353 1/3 (33%)
Ig strand F 441..446 CDD:409353 2/9 (22%)
Ig strand G 455..458 CDD:409353 0/2 (0%)
IG 478..549 CDD:214652 21/71 (30%)
IG_like 580..654 CDD:214653 16/84 (19%)
MAM 775..947 CDD:395504 8/27 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 58 1.000 Domainoid score I10578
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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