DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and si:ch211-215e19.3

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_002660995.5 Gene:si:ch211-215e19.3 / 100332384 ZFINID:ZDB-GENE-060503-685 Length:280 Species:Danio rerio


Alignment Length:193 Identity:43/193 - (22%)
Similarity:82/193 - (42%) Gaps:31/193 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 INKT---LEVHDLETDSL---ELERISRLHMGAYLCIASNGVPPSVSK--RIKVSVDFSPMVWIP 258
            :|:|   ..:.|....|:   |.:.:.......|.|:...|.|.::..  .:.::|..:|.:.:.
Zfish    81 VNETRNKFSITDYPAQSIFTVEWQNLQLSDSSYYWCVVEIGGPGTLDAGYYLYLTVQSAPDLSVM 145

  Fly   259 HQLVGIPIGFNITLECFIEA---NPTSLNYWTRENDQMITESSK---YKTETIPGHPSYKATMRL 317
            :..|....|.|::::||..:   |.|  ..|.|..|:.....:|   ::..::......::...:
Zfish   146 NSSVSGHEGGNVSVQCFYSSGYKNKT--KQWCRVKDKSCFPENKTDTFQNSSVQISDDGESCFTV 208

  Fly   318 TITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSPP-----TTQPP----PTT--TTLRRTTT 369
            .:|.:..||.|.|.|.|    |::...::|.::.|.     ||||.    |||  ||:.|..|
Zfish   209 LMTGLTLSDSGWYFCSA----GNLQVPVQLTVTKPEPKDLYTTQPSAKQIPTTVLTTVSRPGT 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653
Ig 69..139 CDD:143165
IG_like 165..249 CDD:214653 9/54 (17%)
IGc2 172..237 CDD:197706 7/40 (18%)
IG_like 267..348 CDD:214653 18/86 (21%)
Ig 270..339 CDD:299845 15/74 (20%)
si:ch211-215e19.3XP_002660995.5 Ig 51..122 CDD:325142 7/40 (18%)
Ig 149..235 CDD:325142 19/91 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 40 1.000 Domainoid score I12510
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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