DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and nfasca

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:XP_021335211.1 Gene:nfasca / 100141490 ZFINID:ZDB-GENE-080229-6 Length:1379 Species:Danio rerio


Alignment Length:445 Identity:95/445 - (21%)
Similarity:167/445 - (37%) Gaps:140/445 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 AGNVGGSTLNNV---ISEDPEF-TDVIENITVPAGRNVKLACS-VKNLGSYKVAWMHFEQSAILT 95
            :.|:|.:..|.:   :|:.|.: .:|:|.:||..|..:.|||: ...|...:..||   .|.|:.
Zfish   120 SNNLGTAISNKILLRVSKSPLWPKEVLEPVTVREGSPLVLACNPPPGLPPPETFWM---DSFIMP 181

  Fly    96 VHNHVITRNPRISVTHDKHDKHRTWFLHINNVQEED-RGRYMCQ-----INTVTAKTQYGFVKVV 154
                 |.::.|:|:..:..       |..:||..:| :..|.|.     .:|:..|..| .:||.
Zfish   182 -----IAQDRRVSMGLNGD-------LFFSNVLAKDAKTDYSCNARFEFTHTIQQKNPY-TLKVQ 233

  Fly   155 VPPNIDD---------ALTSSDIIVREGDNVTLRCKAKGSPEPTIKWKRDDGNKIVINKTLEVHD 210
            ...||.:         .|:|:.:::| |:.:.|.|.|.|.|.|||.|.:..|:  :..|.:.:.:
Zfish   234 TMRNIPETQPTFLSPTGLSSTKMVLR-GEELLLECIAAGVPTPTITWSKRGGD--LPTKKVRIGN 295

  Fly   211 LETDSLELERISRLHMGAYLCIASNGVPPSVSKRIKVSVDFSPMVWI--PHQLV----------- 262
            .: .:|.:..:|...:|:|.|:|||.: .|:...::|.|..:|. |:  |..||           
Zfish   296 FD-KTLRILNVSEEDIGSYTCMASNRI-GSIRHTVEVQVKAAPF-WLEKPINLVLAPDESGRLVC 357

  Fly   263 ---GIPIGFNITLECFIEANP--TSLNYWTRE--NDQMITESSKYKTETI--------------- 305
               |.|   ..|::..:...|  :||....|.  :|.:|.|:.::::..:               
Zfish   358 RANGSP---KPTIQWLVNGEPIESSLPNPNRRVLDDTIIFETVQFESSAVYQCNASNEHGYLLAN 419

  Fly   306 ------------------------------------------------------PGHPSYKATMR 316
                                                                  .||........
Zfish   420 AFVSVLDMAPRMLGPKNQLIKVIENNRTFLECPFFGSPLPLLRWFKNGLGSGLDGGHYRLYHNGT 484

  Fly   317 LTITNVQSSDYGNYKCVAKNPRGDMDGNIKLYMSSP------PTTQPPPTTTTLR 365
            |.|...::.|.|.|.|||.|..|.|:..::|.:..|      |..:..|..||:|
Zfish   485 LEIKQARTEDQGTYTCVASNILGKMENQVRLEVKEPTRIVRAPEHKTEPRGTTVR 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 26/102 (25%)
Ig 69..139 CDD:143165 17/76 (22%)
IG_like 165..249 CDD:214653 24/83 (29%)
IGc2 172..237 CDD:197706 20/64 (31%)
IG_like 267..348 CDD:214653 21/153 (14%)
Ig 270..339 CDD:299845 19/141 (13%)
nfascaXP_021335211.1 Ig_hNeurofascin_like 60..134 CDD:143283 3/13 (23%)
Ig 139..231 CDD:325142 26/107 (24%)
Ig 263..333 CDD:325142 21/73 (29%)
Ig 351..425 CDD:325142 10/76 (13%)
Ig 449..514 CDD:319273 13/64 (20%)
I-set 522..610 CDD:254352 5/18 (28%)
FN3 628..717 CDD:238020
fn3 731..813 CDD:306538
FN3 828..929 CDD:238020
FN3 934..1018 CDD:238020
FN3 1142..1211 CDD:328772
Bravo_FIGEY 1262..1355 CDD:316405
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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