DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-epsilon and igsf9

DIOPT Version :9

Sequence 1:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001090640.1 Gene:igsf9 / 100036605 XenbaseID:XB-GENE-989817 Length:1423 Species:Xenopus tropicalis


Alignment Length:497 Identity:111/497 - (22%)
Similarity:174/497 - (35%) Gaps:152/497 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LNNVISEDPEFTDVIENITVPAGRNVKLACSVKNLGS-----YKVAWMHFEQSAILTVHNHVITR 103
            :|..|..|.      :.:....|.:..|.||:.:..:     |.:.|:.|  ..:|.:.......
 Frog    17 INGAIRSDS------QTVVGRVGESTVLGCSLLHQDAGRPPLYVIEWVRF--GFMLPIFIKFGLY 73

  Fly   104 NPRISVTHDKHDKHRTWF-----LHINNVQEEDRGRYMCQINTVTAKTQYG--------FVKVVV 155
            :||:    |.....||..     |||.:::.||:|.|.|::  :.....:|        :|.:.|
 Frog    74 SPRV----DPQYLGRTRIEEGASLHIESLRSEDQGWYECRV--LFLDRHHGEEDFQNGTWVHLTV 132

  Fly   156 --PPNIDDALTSSDIIVREGDNVTLRCKAKGSPEPTIKWKRDDGNKIVINKTLEVHD---LETDS 215
              ||:..:. ..:.:.||.||.:||.|.|.|:|:|.:.||||       ..|||..|   ....|
 Frog   133 NSPPSFRET-PPTYVEVRVGDTLTLTCVAYGNPQPVVTWKRD-------GVTLESGDKVQASNGS 189

  Fly   216 LELERISRLHMGAYLCIASNGVPPSVSKRIKVSVDFSPMVWIPHQLVGIPIGFNITLECFIEANP 280
            |.:..:.|.:.|.|.|.|.:. ...|:...:|.|...|::.:|.:...:.:..:..|.|..||.|
 Frog   190 LSIVGVERGNAGVYTCHAFSD-EGEVTHTSRVLVQGPPIIVVPPENTTVNVSQDAFLTCQAEAYP 253

  Fly   281 TSLNY-WTREND----------------------QMITESSKYKTETIPG--------------- 307
            .:|.| |.:.::                      |.:|.....|...||.               
 Frog   254 ANLTYTWFQGSNNVFLLNRLQPRVRILVDGSFLIQRVTPEDAGKYTCIPSNGMWKSPSASAYLTV 318

  Fly   308 -HPSYKATMRLTITNVQSSDY------GNYKC-VAKNP----------------------RGDMD 342
             ||:|       :|::.:..|      |..|| |..||                      ..|.|
 Frog   319 LHPAY-------VTSMPAETYLPIGMRGVIKCPVRANPPLLLVNWTKDGHALELDKYPGWYVDED 376

  Fly   343 GNIKLYMSSPPTTQPPPTTTTLRRTTTTAAEIALDGYINTPLNGNGIGIVGEGPTNSVIASGKSS 407
            |::.:                     .|..:.||..|..||.|..|.|.|.. ||..::....|.
 Frog   377 GSLVI---------------------ATGNDDALGIYTCTPYNSYGTGGVSL-PTEVILKEPPSF 419

  Fly   408 IKYLSNLNEIDKSKQ-----KLTGSSPKGFDWSK----GKSS 440
            |...|.....|..::     ...|..|....|||    |||:
 Frog   420 IDVPSEEYFQDVGRELVIPCSAVGDPPPLIRWSKLGLPGKSA 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 23/113 (20%)
Ig 69..139 CDD:143165 20/79 (25%)
IG_like 165..249 CDD:214653 28/86 (33%)
IGc2 172..237 CDD:197706 24/67 (36%)
IG_like 267..348 CDD:214653 27/148 (18%)
Ig 270..339 CDD:299845 24/136 (18%)
igsf9NP_001090640.1 Ig 25..132 CDD:299845 23/120 (19%)
IG_like 25..110 CDD:214653 21/96 (22%)
I-set 136..222 CDD:254352 29/94 (31%)
IGc2 151..212 CDD:197706 24/68 (35%)
Ig_2 226..318 CDD:290606 15/91 (16%)
I-set 226..318 CDD:254352 15/91 (16%)
IG_like 328..407 CDD:214653 20/99 (20%)
Ig 340..402 CDD:299845 15/82 (18%)
IG_like 431..502 CDD:214653 8/31 (26%)
Ig 439..502 CDD:299845 8/23 (35%)
FN3 507..601 CDD:238020
FN3 624..714 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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