DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42300 and LOC5667039

DIOPT Version :10

Sequence 1:NP_727865.2 Gene:CG42300 / 7354426 FlyBaseID:FBgn0259196 Length:181 Species:Drosophila melanogaster
Sequence 2:XP_001687938.1 Gene:LOC5667039 / 5667039 VectorBaseID:AGAMI1_012589 Length:204 Species:Anopheles gambiae


Alignment Length:181 Identity:46/181 - (25%)
Similarity:87/181 - (48%) Gaps:27/181 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DPKSHQKLFKEMAEVVSNSSDDGEKLLTKNSSNTIEKSEE-----VCKERPEA---------VEQ 55
            |.|.:..|.:::.|:.|..:...:.|....:..|:|..::     :.:::|:.         |:.
Mosquito    32 DLKLYTSLVEKLCEIDSKMNTHRKALAESYAEQTVECFDQRYETSIDRKKPQVRGHKRYKDFVQY 96

  Fly    56 MRIDVNNSLEDTNMNAVESEAQKNIAGLDEDLIME-DFGVEVVPFHDPWSKLLIKHPVRNKRCGH 119
            .:..:|.||:.      :.....|....|.||:|| |.|..|    ||.||..::.|||||:|.|
Mosquito    97 AKPLLNPSLQG------QPSQNDNDDDDDGDLVMEADVGNMV----DPISKRPLEVPVRNKQCNH 151

  Fly   120 IYDRETVLMIIKDNIGILCPVRDCPNLSDIKLEHLVK-DPDVEQELQKRKS 169
            :|::..:..::|.|....|||..|.....:: :||:: |..::|:|.:.:|
Mosquito   152 VYEKSVIENLLKQNPRTRCPVMGCAAQGYVQ-QHLLEVDVRLQQQLIQTRS 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42300NP_727865.2 SPL-RING_NSE2 102..166 CDD:438313 22/64 (34%)
LOC5667039XP_001687938.1 zf-Nse 122..176 CDD:403098 23/57 (40%)

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