DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42306 and Ubxn6

DIOPT Version :9

Sequence 1:NP_001137700.1 Gene:CG42306 / 7354425 FlyBaseID:FBgn0259202 Length:121 Species:Drosophila melanogaster
Sequence 2:XP_038939868.1 Gene:Ubxn6 / 363332 RGDID:1590866 Length:454 Species:Rattus norvegicus


Alignment Length:38 Identity:12/38 - (31%)
Similarity:18/38 - (47%) Gaps:3/38 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ESFNSTLQSIARQVEQFAGVALTAAVDLRGNLESLTGD 45
            |...:||.   ||:..|...||.:..:|..:..|||.:
  Rat   276 EPVRATLD---RQLRVFRPSALASHFELPSDFFSLTAE 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42306NP_001137700.1 None
Ubxn6XP_038939868.1 PUB_UBXD1 171..275 CDD:198418
UBX_UBXN6 348..421 CDD:340536
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2699
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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