DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nsun5 and nsun4

DIOPT Version :9

Sequence 1:NP_650787.1 Gene:Nsun5 / 7354421 FlyBaseID:FBgn0259704 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_021335728.1 Gene:nsun4 / 494106 ZFINID:ZDB-GENE-041212-77 Length:393 Species:Danio rerio


Alignment Length:346 Identity:78/346 - (22%)
Similarity:117/346 - (33%) Gaps:96/346 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 VRSYKDRLLNSIRDFGVQRK--EPNPRYVRINTNLYSLAEALDYLHKSDWR--RKELPADASYAD 165
            :..:||.:....|.:.|:.|  ...|::......|:|..:.........|.  |..:..:..|..
Zfish    11 INKFKDSVRFIPRRYRVKTKWAATRPKFPATELALHSFDKTYSVQFGDLWPSIRVAMLCEQKYGA 75

  Fly   166 FLTAIKSLAENEFMTDLHVEG-------------------------------------------- 186
            .:.:..| |..| :|||..||                                            
Zfish    76 LINSFSS-ASGE-ITDLEAEGCRDFITIDCSRNEVHKSSQDPTTPHNDSTDVESAPLQTSITPDI 138

  Fly   187 -VLIFPAKWSNYWVRHPLVHSK----------RFILQNKATCLAAELLAPPSGATVLDMCAAPGM 240
             .|:||        |..:...|          .:.|.:.|:.|....|....|.||||:|||||.
Zfish   139 KCLVFP--------RGDISRFKPARPDSSGILGYYLLDAASVLPVLALDVRPGQTVLDLCAAPGG 195

  Fly   241 KTV-----HICN-------VMQNKGCIYSVEQDHVRYNTLCEITKDAGCDIVKPILGDALNLTPE 293
            ||:     |..|       .:...|.:..:.|.:|....|.|......|     |.|..|.:..|
Zfish   196 KTLALLQAHSVNHLWANDLSVSRTGRLRKILQSYVPKEFLDEENIHITC-----IDGRELGMREE 255

  Fly   294 RFPDVEYILVDPSCSGSGMQNRMTVCDE-----PKEDKRLQKLQGLQIKILSHAMGAFPNVKRIA 353
            :  ..:.:|||..|:   ......|.:|     ....|..|||..|||::|...:.|......|.
Zfish   256 K--SFDRVLVDVPCT---TDRHSAVVEENNIFKRSRTKERQKLPLLQIQLLVAGIQAARQGGLIV 315

  Fly   354 YCTCSLWKEENEQVVQRCLQL 374
            |.||||.:.:||.|||:.:.:
Zfish   316 YSTCSLSQLQNECVVQQAISV 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsun5NP_650787.1 RsmB <124..428 CDD:223222 74/327 (23%)
nsun4XP_021335728.1 Methyltr_RsmF_N <164..335 CDD:330305 54/180 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0144
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.