DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nsun5 and nsun6

DIOPT Version :9

Sequence 1:NP_650787.1 Gene:Nsun5 / 7354421 FlyBaseID:FBgn0259704 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001008125.1 Gene:nsun6 / 493487 XenbaseID:XB-GENE-947957 Length:467 Species:Xenopus tropicalis


Alignment Length:315 Identity:79/315 - (25%)
Similarity:125/315 - (39%) Gaps:79/315 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 IKSLAENEFMTDLHVEGVLIFPAKWSNYWVRHPLVHSKRF--------ILQNKATCLAAELLAPP 226
            :..|:.||.....:       |.|.....:..|:..|..|        .|||..:.:.:.:|.|.
 Frog   176 VSELSRNEIFCSNN-------PVKGKGIRMTEPVYLSPSFDNVLSGYIFLQNLPSAVVSHVLNPQ 233

  Fly   227 SGATVLDMCAAPGMKTVHICNVMQNKGCIYSVEQ-----DHVRYN----------TLCEITKDAG 276
            .|..:||||||||.||.||..:|:::|.:.::::     :.:::|          ..|..:..|.
 Frog   234 PGERILDMCAAPGGKTTHIATLMKDQGEVIAMDKIANKVEKIKHNASVLKLKCIKAFCFNSTKAV 298

  Fly   277 CDIVKPI-LGDALNLTPERFPDVEYILVDPSCSGSGMQNRMTVCDEPKEDKRLQKLQGLQIKILS 340
            .|...|. .||.....|:.|   :.||:|..|||.|.:..| ||  |...|.|...|.||.|:.:
 Frog   299 RDQNSPSEQGDGPPFLPKSF---DRILLDAPCSGMGQRPNM-VC--PFSLKELTSYQPLQRKLFT 357

  Fly   341 HAMGAFPNVKRIAYCTCSLWKEENEQVVQ------RCLQLNPS------------------FKLL 381
            .|:........:.|.||::...|||:.|.      .||:|.|.                  .|||
 Frog   358 AAVELLRPGGTLVYSTCTVTLSENEEQVAWALKTFPCLELQPQEPHVGGEGMLGAELSPDHLKLL 422

  Fly   382 SCKKALRNKWHNVGDKDYPNIGKNVLYCQPD--------SDLTDGIFLALFEKRR 428
            ......|:::.:|          ::.:|..:        :..|.|.|:|.|.|.|
 Frog   423 QRFDPCRSEFCSV----------DLNHCSAEHSNTIPLANKDTIGFFIARFVKTR 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsun5NP_650787.1 RsmB <124..428 CDD:223222 78/313 (25%)
nsun6NP_001008125.1 PUA 113..202 CDD:214635 5/32 (16%)
RsmB <193..467 CDD:223222 73/289 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.