DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsun5 and nop2

DIOPT Version :9

Sequence 1:NP_650787.1 Gene:Nsun5 / 7354421 FlyBaseID:FBgn0259704 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001288288.1 Gene:nop2 / 321130 ZFINID:ZDB-GENE-050309-7 Length:739 Species:Danio rerio


Alignment Length:443 Identity:102/443 - (23%)
Similarity:169/443 - (38%) Gaps:139/443 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IKTLIFAEKHARTRSLHTVLKKFSENRVALEKAIEETGLLRDNPSFDPSLAKILVTELLFGRKEL 95
            :||:     |.|.:....||..|:|.|...::..|...|||.:                      
Zfish   234 LKTI-----HQRIKDNVDVLSNFNEKREEGKERSEYLSLLRAD---------------------- 271

  Fly    96 NGESKPVQTVRSYKDRLLNSIRDFGVQRKEPNPRYVRINTNLYSLAEALDYLHKSDWRRKELPAD 160
                  :.|..||...|::.:.|                  |:||:|.:|:|..::..|   |..
Zfish   272 ------LCTYYSYNQFLISKLMD------------------LFSLSELIDFLEANEVHR---PVT 309

  Fly   161 ASYADFLTAIKSLAENEFMTDLHVEGVLIFP-AKWS-----------------NYWVRHPLVHSK 207
            .......|..:.||:     .|...||.:.| .|||                 .|...|      
Zfish   310 IRTNTLKTRRRDLAQ-----ALINRGVNLDPLGKWSKVGLVIYDSSVPIGATPEYLAGH------ 363

  Fly   208 RFILQNKATCLAAELLAPPSGATVLDMCAAPGMKTVHICNVMQNKGCIYSVEQDHVRYNTLCEIT 272
             ::||..::.|....|:|..|.:||||.||||.||.::..:|:|.|.|               :.
Zfish   364 -YMLQGASSFLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMI---------------VA 412

  Fly   273 KDAGCDIVKPILGD----------ALNLTPERFPDV----EYILVDPSCSGSGMQNRMTVCDEPK 323
            .||..|.:|.::|:          ..|....:||.|    :.:|:|..|||:|:.::.......|
Zfish   413 NDANVDRLKSVVGNIHRLGVTNAVICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTGK 477

  Fly   324 EDKRLQKLQGLQIKILSHAMGAFPNVKR-------IAYCTCSLWKEENEQVV-----QRCLQLNP 376
            ::..:.:...||.:::   :.|..:|..       :.|||||:..||||.||     :|.::|.|
Zfish   478 DEADILRSAHLQKELI---LSAIDSVNADSQTGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVP 539

  Fly   377 S---FKLLSCKKALRNKWHNVGDKDYPNIGKNVLYCQPDSDLTDGIFLALFEK 426
            :   |......:....::|       |::..:..: .|.|...||.|:|..:|
Zfish   540 TGLDFGKEGFTRFKEKRFH-------PSLKLSRRF-YPHSHNMDGFFVAKLKK 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsun5NP_650787.1 RsmB <124..428 CDD:223222 84/350 (24%)
nop2NP_001288288.1 Methyltr_RsmF_N <297..371 CDD:293730 18/88 (20%)
nop2p 310..584 CDD:188051 75/311 (24%)
Nol1_Nop2_Fmu 375..583 CDD:279522 60/233 (26%)
SRP-alpha_N <555..>682 CDD:282006 9/38 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0144
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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