DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsun5 and nop2

DIOPT Version :9

Sequence 1:NP_650787.1 Gene:Nsun5 / 7354421 FlyBaseID:FBgn0259704 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_002941729.1 Gene:nop2 / 100490904 XenbaseID:XB-GENE-962291 Length:749 Species:Xenopus tropicalis


Alignment Length:375 Identity:82/375 - (21%)
Similarity:145/375 - (38%) Gaps:108/375 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 KPVQTVRSYKDRLLNSIRDFGVQRKEPNPRYVRINTNLYSLAEALDYLHKSDWRRKELPADASYA 164
            |.:.|..||.|.::.::                  :.|:.::|.:|:|...:.:|   |......
 Frog   293 KDLATYYSYGDYMIETL------------------SELFPVSELVDFLEACEVQR---PITIRTN 336

  Fly   165 DFLTAIKSLAENEFMTDLHVEGVLIFPAKWS-----------------NYWVRHPLVHSKRFILQ 212
            ...|..:.||:......::::.:    .|||                 .|...|       ::||
 Frog   337 TLKTRRRDLAQALINRSVNLDPL----GKWSKTGLVIYDSSVPIGATPEYLAGH-------YMLQ 390

  Fly   213 NKATCLAAELLAPPSGATVLDMCAAPGMKTVHICNVMQNKGCIYSVEQDHVRYN----------- 266
            ..::.|....|||.....|||||.|||.||.::..:|:|.|.:.:.:.:..|..           
 Frog   391 GASSLLPVIALAPQENERVLDMCCAPGGKTSYMAQLMKNTGIVVANDMNADRLRSVVGNLHRLGV 455

  Fly   267 TLCEITKDAGCDIVKPILGDALNLTPERFPDVEYILVDPSCSGSGMQNRMTVCDEPKEDKRLQKL 331
            |.|.|:...|..|.| :||           ..:.:|:|..|||:|:.::.......|..:.:|:.
 Frog   456 TNCIISNYDGRQISK-VLG-----------GFDRVLLDAPCSGTGIISKDPAVKTNKSVQDVQRC 508

  Fly   332 QGLQIKILSHAMGAFPNVKR----IAYCTCSLWKEENEQVV-----QRCLQLNPS---------- 377
            ..:|.:::..|:.|.....:    :.|||||:..||||.||     :|.::|.|:          
 Frog   509 AHIQKELILSAIDALDAQSQTGGFMVYCTCSITVEENECVVDYALKKRNVKLVPTGLDFGKEGFV 573

  Fly   378 -FKLLSCKKALRNKWHNVGDKDYPNIGKNVLYCQPDSDLTDGIFLALFEK 426
             ||        ..::|       |:: :......|.:...||.|:|...|
 Frog   574 RFK--------ERRFH-------PSL-RQARRFYPHTHNMDGFFIAKLRK 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nsun5NP_650787.1 RsmB <124..428 CDD:223222 77/351 (22%)
nop2XP_002941729.1 nop2p 333..607 CDD:188051 70/312 (22%)
valS <613..725 CDD:237855
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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