DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nsun5 and nsun6

DIOPT Version :9

Sequence 1:NP_650787.1 Gene:Nsun5 / 7354421 FlyBaseID:FBgn0259704 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_005169112.1 Gene:nsun6 / 100149557 ZFINID:ZDB-GENE-080808-8 Length:459 Species:Danio rerio


Alignment Length:267 Identity:72/267 - (26%)
Similarity:112/267 - (41%) Gaps:47/267 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 PLVHSKRF--------ILQNKATCLAAELLAPPSGATVLDMCAAPGMKTVHICNVMQNKGCIYSV 258
            ||..|..|        .|||..:.:...:|.|..|..|||||||||.||.||.::|.|:|.:.::
Zfish   199 PLYQSPSFDGVLTDELFLQNLPSVVVGYVLGPRPGERVLDMCAAPGGKTTHIASLMGNQGVVVAL 263

  Fly   259 EQDHVRYNTL--------CEITKDAGCDIVKPILGDALNLTPE--RFPDVEY--ILVDPSCSGSG 311
            |:...:...:        .:..|...|:.:..:..|......|  .||:..:  ||:|..|||.|
Zfish   264 EKVRSKMEKILRNAQMLKLDCIKAYCCNSIHAVSSDPAQEYTEGPPFPEESFDRILLDAPCSGLG 328

  Fly   312 MQNRMTVCDEPKEDKRLQKLQGLQIKILSHAMGAFPNVKRIAYCTCSLWKEENEQVVQRCLQLNP 376
            .:..|:.....||   :...|.||.|:.:.|:....:...:.|.||::...|||:.|...|:..|
Zfish   329 QRPNMSYSWSLKE---VCSYQPLQRKLFTTAVRLLKSGGVLVYSTCTVTLAENEEQVSWALKTFP 390

  Fly   377 SFKL----------------LSCK-----KALRNKWHNVGDKDYPNIGKNVLYCQPDSDLTDGIF 420
            ...|                |||:     :..|.:....|::...::.|   ..|..:..|.|.|
Zfish   391 CLTLQPQVPHVGSEGMLGAGLSCEQRRLLQRFRPELGWTGERFTFSLEK---LPQDANQDTIGFF 452

  Fly   421 LALFEKR 427
            :|.|.||
Zfish   453 IAKFSKR 459

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Nsun5NP_650787.1 RsmB <124..428 CDD:223222 72/267 (27%)