DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42376 and cox6b1

DIOPT Version :10

Sequence 1:NP_001138136.1 Gene:CG42376 / 7354420 FlyBaseID:FBgn0259722 Length:92 Species:Drosophila melanogaster
Sequence 2:NP_001002695.1 Gene:cox6b1 / 436968 ZFINID:ZDB-GENE-040718-448 Length:86 Species:Danio rerio


Alignment Length:72 Identity:18/72 - (25%)
Similarity:35/72 - (48%) Gaps:6/72 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FPDKAERKKCWNNRDEYWKCLEEHAPKHSSTSGEKVPTPCQSLRKSFEQSCPGQWVKHFDRKRTY 67
            ||::.:.:.||.|..:|.:|.:....|...|:      ||...::.::..||..|::.:|.:|..
Zfish    21 FPNQNQTRNCWQNYLDYHRCQKALDAKGVDTA------PCDWYKRVYKSLCPLSWIEKWDTQREE 79

  Fly    68 DQFKEKM 74
            ..|..|:
Zfish    80 GNFPGKI 86

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42376NP_001138136.1 COX6B 3..67 CDD:426708 16/63 (25%)
cox6b1NP_001002695.1 Cyt_c_Oxidase_VIb 8..85 CDD:238466 17/69 (25%)

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