DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42376 and cox-6B

DIOPT Version :10

Sequence 1:NP_001138136.1 Gene:CG42376 / 7354420 FlyBaseID:FBgn0259722 Length:92 Species:Drosophila melanogaster
Sequence 2:NP_497618.1 Gene:cox-6B / 3565081 WormBaseID:WBGene00022170 Length:121 Species:Caenorhabditis elegans


Alignment Length:71 Identity:14/71 - (19%)
Similarity:31/71 - (43%) Gaps:9/71 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FPDKAERKKCWNNRDEYWKCLEEHAPKHSSTSGEKVPTPCQSLRKSFEQSCPGQWVKHFDRKRTY 67
            ||...::::|:....::.:|.|.....:.         ||:..:..::..|||.|.:.:|...:.
 Worm    57 FPQVRKQRQCFAYYVDFHRCNELMGQDYK---------PCKFFQNVYKDFCPGFWTERWDELLSE 112

  Fly    68 DQFKEK 73
            .:|..|
 Worm   113 GRFPAK 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42376NP_001138136.1 COX6B 3..67 CDD:426708 12/63 (19%)
cox-6BNP_497618.1 Cyt_c_Oxidase_VIb 44..118 CDD:238466 13/69 (19%)

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