DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42376 and COX6B

DIOPT Version :10

Sequence 1:NP_001138136.1 Gene:CG42376 / 7354420 FlyBaseID:FBgn0259722 Length:92 Species:Drosophila melanogaster
Sequence 2:XP_003435734.1 Gene:COX6B / 11176134 VectorBaseID:AGAMI1_007131 Length:76 Species:Anopheles gambiae


Alignment Length:68 Identity:16/68 - (23%)
Similarity:32/68 - (47%) Gaps:9/68 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FPDKAERKKCWNNRDEYWKCLEEHAPKHSSTSGEKVPTPCQSLRKSFEQSCPGQWVKHFDRKRTY 67
            ||::.:.|.|:.:..::.:|      :.....|::|   |:..:..|...||..||:.:|.:|..
Mosquito    14 FPNQNQTKHCYQSYLDFHRC------EKVKGEGDQV---CKYFKNVFSSMCPNSWVEKWDSQREE 69

  Fly    68 DQF 70
            ..|
Mosquito    70 GTF 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42376NP_001138136.1 COX6B 3..67 CDD:426708 15/63 (24%)
COX6BXP_003435734.1 Cyt_c_Oxidase_VIb 1..74 CDD:238466 16/68 (24%)

Return to query results.
Submit another query.