DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42376 and Coa6

DIOPT Version :10

Sequence 1:NP_001138136.1 Gene:CG42376 / 7354420 FlyBaseID:FBgn0259722 Length:92 Species:Drosophila melanogaster
Sequence 2:NP_001388022.1 Gene:Coa6 / 102556031 RGDID:7559315 Length:79 Species:Rattus norvegicus


Alignment Length:77 Identity:35/77 - (45%)
Similarity:47/77 - (61%) Gaps:9/77 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSFPDKAERKKCWNNRDEYWKCLEEHAPKHSSTSGEKVPTPCQSLRKSFEQSCPGQWVKHFDRKR 65
            |:.|...||:.||..||.||:||:::|...:.         ||.||.|||.|||.||:|:||::|
  Rat     1 MAAPSMKERQACWGARDLYWRCLDDNAEDAAR---------CQKLRSSFEASCPQQWIKYFDKRR 56

  Fly    66 TYDQFKEKMAQG 77
            .|.:||||...|
  Rat    57 DYLKFKEKFEAG 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42376NP_001138136.1 COX6B 3..67 CDD:426708 28/63 (44%)
Coa6NP_001388022.1 Cyt_c_Oxidase_VIb 4..64 CDD:238466 31/68 (46%)

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