DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7f and grik1a

DIOPT Version :9

Sequence 1:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster
Sequence 2:XP_009303592.1 Gene:grik1a / 798001 ZFINID:ZDB-GENE-030131-6502 Length:919 Species:Danio rerio


Alignment Length:466 Identity:84/466 - (18%)
Similarity:174/466 - (37%) Gaps:80/466 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 NTFDG---RKWKASQMFPDKLSQMHGCPLTVLTWHQPPFVELVWDPK--HNRSRGSGFEIQLVEH 263
            |::.|   .:.|.::...|.|:..   .|.|.|..:.|:|......|  :...|..|:.:.|::.
Zfish   424 NSYTGLNLTEIKDNKNITDSLANR---TLIVTTILENPYVMYKKSDKVLYGNDRFEGYCLDLLKE 485

  Fly   264 LARRMNFSLELVNIALLRPNAY--RLAEGSSEGPIEKLLQRNVNISMGYFRKTARRNQLLTTPMS 326
            |:..:.|:.|   :.|:....|  :..:|...|.:.:|:....::::.....|..|.:::.....
Zfish   486 LSNILGFTYE---VKLVTDGKYGAQNDKGEWNGMVRELIDHIADLAVAPLTITYVREKVIDFSKP 547

  Fly   327 YYSANLVAVLQLERYRIGSLALLVFPFELSVWMLLLLALLIHLGIHLPSARRG-----NEEDGGG 386
            :.:..:..:.:........:...:.|....:||.:|||.|....:....||..     |......
Zfish   548 FMTLGISILYRKPNGTNPGVFSFLNPLTPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNP 612

  Fly   387 GLQVV--------ALLLG-AALAR-----LPRSWRHRFIAAHWLWASIPLRISYQSLLFHLIRLQ 437
            ..:||        :|..| |||.|     :|::...|.:...|.:.::.:..||.:.|...:.::
Zfish   613 SSEVVENNFTLLNSLWFGVAALMRQGSELMPKALSTRILGGIWWFFTLIIISSYTANLAAFLTVE 677

  Fly   438 LYNTPSFSLDQLLAEGFQGICTANTQRLLLEMPQLARDPDSI----QSVDTPFD--WDVLN---- 492
            ..::|..|.|.|            .::..:|...: ||..::    :|..:.::  |..::    
Zfish   678 RMDSPIDSADDL------------AKQTRIEYGAV-RDGSTMTFFKKSKISTYEKMWAFMSSRKN 729

  Fly   493 -VLTRNRNRKIFAVANQDVTLSFLHSSAHPNAFHVVKQPVNVEYA---------GMYMPKHSFLY 547
             .|.:|....|..|...|..|....:|..    ::.::..|:...         |:..|..|...
Zfish   730 TALVKNSKDGITRVLTTDYALLMESTSIE----YITQRNCNLTQVGGLIDSKGYGVGTPIGSPYR 790

  Fly   548 EKMDDDIRRLDASGFIHA-----WRRASFASVHRKEQVHMTSRRYINHAKLSGIYMVMAGLYLLA 607
            :|:...|.:|...|.:|.     ||.........||      ...:....:.||::|:|...:|:
Zfish   791 DKVTIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKE------ASALGVENIGGIFIVLAAGLVLS 849

  Fly   608 GLLFAGEVLLR 618
            ..:..||.:.:
Zfish   850 VFVAIGEFIYK 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:304360 19/130 (15%)
grik1aXP_009303592.1 Periplasmic_Binding_Protein_Type_1 37..432 CDD:299141 2/7 (29%)
ANF_receptor 57..398 CDD:279440
Periplasmic_Binding_Protein_Type_2 446..815 CDD:304360 68/391 (17%)
Lig_chan 577..846 CDD:278489 56/291 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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