DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7f and grid1a

DIOPT Version :9

Sequence 1:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster
Sequence 2:XP_021323097.1 Gene:grid1a / 793756 ZFINID:ZDB-GENE-120411-28 Length:1044 Species:Danio rerio


Alignment Length:715 Identity:139/715 - (19%)
Similarity:250/715 - (34%) Gaps:201/715 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YKSYLENSRIDMQGEDANLYVARALRLVIENVLAQLSTTLVVTISTRHLGTAHWF---------E 77
            |:..|..:.:.:....|.:::.:|    :|..||...              :||.         |
Zfish   220 YRDTLRRAILLLSPRTAQVFIHQA----VETNLASKD--------------SHWVYANEEVSDTE 266

  Fly    78 YMMNILMDSWRMVAV-QLLRIRPDLVVNPVPGRKRVSLLMVDSYQGLLDTNITASNANFDDPDYY 141
            .|..:.....||..: |:..:..|..:..:....|:|.|:.|..:|.|.:...:|...:|.    
Zfish   267 IMELVHSALGRMTVIRQIFPLWRDTNIRCMRNNHRISSLLCDPQEGYLQSLEVSSLYLYDS---- 327

  Fly   142 FIFLQARDHLIPKELQLILDHCLAHFWLHCN-----------VMIQT------------------ 177
             :.:.|  :...::|:....|.:|.  |:|.           .|:.|                  
Zfish   328 -VLMLA--NAFYRKLEDRKWHSMAS--LNCMRKSTKPWNGGWSMLDTIQKGRISGLTGLMDFRSN 387

  Fly   178 -----AQVEVLVYTY-YPYTADACQKAYPIPVNTFDGRKWKASQMFPDKLSQ-MHGCPLTVLTWH 235
                 .|.|:|..:| ..:..|..:.|      |:|..:.....:..::... |.|..|.|:|..
Zfish   388 GANSHVQFEILGTSYSETFGKDVKRLA------TWDSDRGLNGSLRENRADHGMQGITLKVVTLL 446

  Fly   236 QPPFV----ELVWDPKHNRSRGSGFEIQLVEHLARRMNFSLELVNIALLRPNAYRLAEGSSEGPI 296
            :.|||    .::..||    |..||.|.:::.||:.:.|..|:..:|..:..:.: ..||..|.|
Zfish   447 EEPFVMVAENILGQPK----RYKGFSIDVLDALAKILGFKYEMYQVADAKYGSPQ-TNGSWNGMI 506

  Fly   297 EKLLQRNVNISMGYFRKTARRNQLLTTPMSY--YSANLVAVLQLERYRIGSLALLVFPFELSVWM 359
            .:|:.:..::::.....|..|..::.....|  ||..::.....||..|.|   |:.||:|:||.
Zfish   507 GELIGKRADVAISAITITPERENVVDFSKRYLDYSVGILMTKTEERLNIFS---LLAPFDLAVWA 568

  Fly   360 LLLLAL-----LIHL-------------GIHLPSARRGNEEDG-----------GGGLQVVALLL 395
            .:..|:     ::.|             |.|.|::...:.:..           ||...:.::.|
Zfish   569 CIAAAIPVVGVMVFLLRRVQSVRSQNPPGPHQPASVTTSFQSAIWIVYGAFVQQGGESFMSSMAL 633

  Fly   396 GAALARLPRSWRHRFIAAHWLWASI------------------------------PLRISY---- 426
            ..|:.    ||        ||:..|                              ...|:|    
Zfish   634 RIAMG----SW--------WLFTLIVCSSYTANLAAYLTVSRMDNAIRTFQDLSKQSEINYGTVR 686

  Fly   427 QSLLFHLIRLQLYNTPSFSLDQLLAEGFQGICTANTQRLLLEMP-----QLARDPDSIQSVDTPF 486
            :|.:|...|::  .|.....|...||.::.|.....|...:..|     ::.|||.:       |
Zfish   687 ESAVFEYFRVK--GTNPLEQDSTFAELWRTINKNQGQDNSVTSPAEGIRKVKRDPYA-------F 742

  Fly   487 DWDVLNVLTRNRNRKIFAVANQDVTLSFLHSSAHPNAFHVVKQPVNVEYAGMYMPKHSFLYEKMD 551
            .|| :.||      :..|:.:.|.||....:......:.:..|. ...|..::..|...|.||.|
Zfish   743 LWD-MAVL------EYAALTDDDCTLVVTGNGMSSKGYGLALQH-GSPYRDLFSQKILDLQEKGD 799

  Fly   552 DDIRRLDASGFIHAWRRASFASV--HRKEQVHMTSRRYINHAKLSGIYMVMAGLYLLAGLLFAGE 614
            .||.:.      ..|.|.....:  |.:.|   |..|.:.....:|::.::|...|||.|:.|.|
Zfish   800 LDILKQ------KWWPRKGRCDLDKHAEPQ---TEGRALRLHSFAGVFCILAAGLLLACLVAALE 855

  Fly   615  614
            Zfish   856  855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:304360 34/132 (26%)
grid1aXP_021323097.1 Periplasmic_Binding_Protein_Type_1 25..424 CDD:324556 39/236 (17%)
PBP2_iGluR_delta_1 437..809 CDD:270448 85/414 (21%)
DNA_pol3_gamma3 <915..1044 CDD:331207
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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