DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7f and GluRIB

DIOPT Version :9

Sequence 1:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster


Alignment Length:538 Identity:88/538 - (16%)
Similarity:171/538 - (31%) Gaps:202/538 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 VLTWHQPPFVEL----VWDPKHNRSRGSGFEIQLVEHLARRMNFSLELVNIALLRPNAY----RL 287
            |.|..:.|::.|    ..:..|..:|..|:...|.:.||:.:..:.||   .|::...|    ..
  Fly   502 VTTVLEEPYIMLKQVAFGEKLHGNNRFEGYCKDLADLLAKELGINYEL---RLVKDGNYGSEKSS 563

  Fly   288 AEGSSEGPIEKLLQRNVNISMGYFRKTARRNQLLTTPMSYYSANLVAVLQLERYRIGSLALLVFP 352
            |.|..:|.:.:|:::..:|::.....||.|.:::.....:.|..:..:::....:...:...:.|
  Fly   564 AHGGWDGMVGELVRKEADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFSFMNP 628

  Fly   353 FELSVWMLLLLALLIHLGI------------------------------HLPSARRGNEEDGG-- 385
            ....:|:.::.:   ::|:                              |....:..|::..|  
  Fly   629 LSQEIWVSVIFS---YIGVSIVLFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGII 690

  Fly   386 GGLQVV---------------ALLLGAALAR---------------------------------- 401
            ||..:.               |..|.|||:.                                  
  Fly   691 GGAPLPAPPGPPTPGAQTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGC 755

  Fly   402 --LPRSWRHRFIAAHWLWASIPLRISYQSLLFHLIRLQLYNTPSFSLDQL----------LAEGF 454
              .|||...|..||.|.:.::.|..||.:.|...:.::...||..|.:.|          |..|.
  Fly   756 DLSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQYGTLLHGS 820

  Fly   455 --------------------------------QGICTANTQR----LLLEMPQ----LARDPDSI 479
                                            :||......:    ||:|.|:    .||:|...
  Fly   821 TWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDEGIKRVRNSKGKYALLVESPKNEYVNAREPCDT 885

  Fly   480 QSVDTPFDWDVLNVLTRNRNRKIFAVANQDVTLSFLHSSAHPNAFHVVKQPVNV------EYAGM 538
            ..|.            ||.:.|.|.:|..      |.|:        :|.|:|:      |...:
  Fly   886 MKVG------------RNLDTKGFGIATP------LGSA--------LKDPINLAVLTLKENGEL 924

  Fly   539 YMPKHSFLYEKMDDDIRRLDASGFIHAWRRASFASVHRKEQVHMTSRRYINHAKLSGIYMVMAGL 603
            ...::.:.|||.:                    .|.|:..:   ||...::.:.::||:.::.|.
  Fly   925 IKLRNKWWYEKAE--------------------CSTHKDGE---TSHSELSLSNVAGIFYILIGG 966

  Fly   604 YLLAGLLFAGEVLLRQRN 621
            .|::..:...|...|.|:
  Fly   967 LLVSVFVAILEYCFRSRD 984

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:304360 24/134 (18%)
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375
ANF_receptor 55..461 CDD:279440
PBP2_iGluR_AMPA 497..938 CDD:270433 77/487 (16%)
Lig_chan 632..967 CDD:278489 60/386 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462562
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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