DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7f and Ekar

DIOPT Version :9

Sequence 1:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_001036250.1 Gene:Ekar / 43806 FlyBaseID:FBgn0039916 Length:899 Species:Drosophila melanogaster


Alignment Length:804 Identity:128/804 - (15%)
Similarity:266/804 - (33%) Gaps:241/804 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YSIY-----KSYLENSRIDMQGEDANLY--------VARALRLVIENVLAQLSTTLVVTIST--- 67
            |:|:     ||.|..:.:|...|..|.:        |.:.:|:.::.|.:...:.|...|::   
  Fly    44 YAIHRLNMDKSLLPETTVDYYVEYVNRFDSFETVQKVCKLIRVGVQAVFSPTDSVLATHINSICD 108

  Fly    68 ----RHLG-TAHWF-----------EYMMNILMDSWRMVAVQLLRIRPDLVVN------PVPGRK 110
                .::| :||.|           .|..|.::.........:|..:.:.::|      ...|..
  Fly   109 ALDIPNIGRSAHDFSINVYPSKQLVNYAFNDVIQYLNWTRFGILHEKENGIINLHQLSRSFHGEV 173

  Fly   111 RVSLLMVDSYQG-------------LLDTN-----ITASN---ANFDDPDYYFIF----LQARD- 149
            .:..:..|||..             ::|||     |...|   ...::..|:::|    |:..| 
  Fly   174 HMRQVSRDSYVSALNEFKGKEIHNIIIDTNSNGISILLKNILQQQMNEYKYHYLFTSFDLETYDL 238

  Fly   150 -----------------------HLIPKELQLILDHCLAHFWLHCNVMIQT---AQVEVLVYTYY 188
                                   ..|.|::.|...|.....:|:.::...|   ::..::..:.|
  Fly   239 EDFKYNFVNITSFRLVDTADVGVKQILKDIGLYSHHIFKKPYLNLHIKKSTILESEPALMFDSVY 303

  Fly   189 PYTAD---------------ACQKAYPIPVNTFDGR----------KWKASQ---MFPD------ 219
            .:...               :|::.     |::||.          :||...   .|.|      
  Fly   304 VFAIGLQTLEQSHSLTLLNISCEEE-----NSWDGGLSLINYLNAVEWKGLTGPIQFKDGQRVQF 363

  Fly   220 -----KLSQ----------MHG-----------------CPLTVLTWHQPPFVELVWDPKH-NRS 251
                 ||.|          .||                 ..|.|:|..:.|:|.:.:.... ...
  Fly   364 KLDLIKLKQHSIVKVGEWTPHGHLNITEPSMFFDAGSMNVTLVVITILETPYVMMHYGKNFTGNE 428

  Fly   252 RGSGFEIQLVEHLARRMNFSLELVNIALLRPNAYRLAEGSSEGPIEKLLQRNVNISMGYFRKTAR 316
            |..||.:.::|.::|.:.|...|..:...:..|.....|...|.:.:|::...::::|....|..
  Fly   429 RFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLAVGSMTITYA 493

  Fly   317 RNQLLTTPMSYYSANLVAVLQLERYRIGSLALLVFPFELSVWMLLLLA-LLIHLGIHLPSARRGN 380
            |..::.....:.:..:..:.::.......|...:.|..:.:|:.:|:| .|:.|.|::.......
  Fly   494 RESVIDFTKPFMNLGISILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFLVSLCIYIVGKLSPI 558

  Fly   381 E---------EDGGGGLQ---------VVALLLGAALARLPRSWRHRFIAAHWLWASIPLRISYQ 427
            |         |:...|.|         .:...:..:....||:...|.|::.|.:.|:.:..||.
  Fly   559 EWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYT 623

  Fly   428 SLLFHLIRLQLYNTPSFSLDQLLAE---GFQGICTANTQRLLLEMPQLARDPDSI--------QS 481
            :.|...:..:....|..:.:.|.::   .:..:.:.:|....         .||:        :|
  Fly   624 ANLAAFLTTERMINPIENAEDLASQTEISYGTLDSGSTMTFF---------RDSVIETYKKIWRS 679

  Fly   482 VDTPFDWDVLNVLTRNRNRKIFAVANQD-------VTLSFLHSSAHPNAFHVVKQPVNVEYA--- 536
            :|             |:....|....:|       ...:||..|...:  ::|::..|:...   
  Fly   680 MD-------------NKKPSAFTTTYEDGIKRVNQGNYAFLMESTMLD--YIVQRDCNLTQIGGL 729

  Fly   537 ------GMYMPKHSFLYEKMDDDIRRLDASGFIH----AWRRASFASVHRKEQVHMTSRRYINHA 591
                  |:..||.|...:|:...|..|...|.|.    .|.:.:..:..||.....:....:...
  Fly   730 LDTKGYGIATPKGSPWRDKISLAILELQERGDIQMLYDKWWKNTDETCTRKNTSKQSKANSLGLE 794

  Fly   592 KLSGIYMVMAGLYLLAGLLFAGEV 615
            .:.|:::|     |:||::.|..|
  Fly   795 SIGGVFVV-----LIAGIIVAAVV 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:304360 20/127 (16%)
EkarNP_001036250.1 PBP1_iGluR_Kainate 24..388 CDD:107377 54/348 (16%)
ANF_receptor 39..371 CDD:279440 50/331 (15%)
PBP2_iGluR_Kainate 402..771 CDD:270432 65/392 (17%)
Lig_chan 533..807 CDD:278489 50/302 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463112
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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