DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir7f and Ir10a

DIOPT Version :9

Sequence 1:NP_001138177.1 Gene:Ir7f / 7354418 FlyBaseID:FBgn0259188 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:609 Species:Drosophila melanogaster


Alignment Length:561 Identity:118/561 - (21%)
Similarity:213/561 - (37%) Gaps:99/561 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 GRKRVSLLMVDSYQGLLDTNITASNANFDDPDYYFIFLQARDHLIPKELQLILDHCLAHFWLHCN 172
            ||:  :|::|.|...|| ||..|: |.......:|..|..:|..:..:.||.|:......|....
  Fly    83 GRR--NLVLVMSLDQLL-TNRGAA-APIQKASTFFYILADQDKDLSADEQLRLEGSCRQLWTQHK 143

  Fly   173 VMIQTAQVEVLVYTYYPYTADACQKAYPIPVNTFDGR--KWKASQMFPDKL--SQMHGCPLTVLT 233
            |..:.......|:.|.|:...  ..|:        ||  ::..|:.. |||  ..|.|.||.:  
  Fly   144 VYNRFFLTRDGVWIYDPFKRR--DSAF--------GRLVRYYGSETL-DKLLFRDMAGYPLRI-- 195

  Fly   234 WHQPPFVELVWDPKHNRSRG-----SGFEIQLVEHLARRMNFSLELVNIALLRPN----AYRLAE 289
               ..|..:...|:.::..|     :|.:..:.:.|..|:||::     .|.:|.    ..|.|.
  Fly   196 ---QMFRSVYTRPEFDKETGLLTRVTGVDFLVAQMLRERLNFTM-----LLQQPEKKYFGERSAN 252

  Fly   290 GSSEGPIEKLLQRNVNISM-GYFRKTARRNQLLTTPMSYYSANLVAVLQLERYRIGSLALLVFPF 353
            ||..|.|..:::..::|.: |:|.|.....|.:...::.|...| .:...:..||....|.:|..
  Fly   253 GSYNGAIGSIIKDGLDICLTGFFVKDYLVQQYMDFTVAVYDDEL-CIYVPKASRIPQSILPIFAV 316

  Fly   354 ELSVWM----------LLLLAL-LIHLGIHLPSARRGNEEDGGGGLQVV----ALLLGAALARLP 403
            ...:|:          |:.|.| :|:|.:.:.|.  ||:...|..|.::    .:.:...|:.||
  Fly   317 GYDIWLGFVLTAFACALIWLTLRVINLKLRIVSL--GNQHIVGQALGIMVDTWVVWVRLNLSHLP 379

  Fly   404 RSWRHRFIAAHWLWASIPLRISYQSLLFHLIRLQLYNTPSFSLDQLLAEGFQGICTANTQRLLLE 468
            .|:..|.........|:.....::|.|..:....||.....::.:|...|.         :::.:
  Fly   380 ASYAERMFIGTLCLVSVIFGAIFESSLATVYIHPLYYKDINTMQELDESGL---------KVVYK 435

  Fly   469 MPQLARD------PDSIQSVDTPFDW------DVLNVLTRNRNRKIFAVANQDVTLSFLHSSAHP 521
            ...:|.|      .....|::....|      ||::.:.|.||:     |......|.:..|:| 
  Fly   436 YSSMADDLFFSETSPLFASLNKKLSWNRDLRADVIDEVARFRNK-----AGVSRYTSLILESSH- 494

  Fly   522 NAFHVVKQPVNVEYAGMY------MPKHSFLYEKMDDDIRRLDASGFIHAWRRASFASVHRKEQV 580
              |.::::...|.....|      ||:.|...:.::..:.|...:|.|..|.:...:.|..|.:.
  Fly   495 --FTLLRKIWVVPECPKYYTISYVMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRS 557

  Fly   581 HMTSR-------RYINHAKLSGIYMVMAGLYLLAGLLFAGE 614
            ::...       |.:....|...:.|:.|..|||.|.|..|
  Fly   558 NILEADAESELVRVLTIGDLQLAFYVVIGGNLLAFLGFLAE 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7fNP_001138177.1 Periplasmic_Binding_Protein_Type_2 231..>358 CDD:304360 27/136 (20%)
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:304360 18/78 (23%)
TM_PBP1_branched-chain-AA_like 315..>411 CDD:294309 19/97 (20%)
Lig_chan 319..587 CDD:278489 51/286 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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